Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 RN7SL708P-201ENST00000580952 299 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC110743.1-201ENST00000584870 478 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AP001542.2-201ENST00000593141 364 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL160237.3-201ENST00000604114 1013 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 SUGT1P3-202ENST00000604259 383 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC002487.1-201ENST00000604565 994 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 TAS2R6P-201ENST00000605022 826 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL157392.4-201ENST00000609756 345 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL035461.2-201ENST00000619201 524 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC109454.4-201ENST00000623411 649 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC38Q502W7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC138393.1-206ENST00000540997 1886 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC025263.3-201ENST00000622965 1396 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 RNA5SP242-201ENST00000364171 118 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC013442.1-201ENST00000397347 228 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL449283.1-202ENST00000418249 604 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 CYCSP6-201ENST00000434498 302 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 TMX2P1-201ENST00000436507 708 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL450263.2-201ENST00000439400 589 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL009048.1-201ENST00000450437 298 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC239809.1-201ENST00000450470 217 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 RN7SL189P-201ENST00000468631 289 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 RN7SL717P-201ENST00000478343 297 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 RN7SL184P-201ENST00000488308 297 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 RPL21P131-201ENST00000497298 483 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 snoZ278.1-201ENST00000517059 112 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 HMGB1P40-201ENST00000525121 540 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 DEFB130C-202ENST00000530001 230 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 NIFKP8-201ENST00000560500 874 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 RPL10P14-201ENST00000565265 298 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC027455.1-201ENST00000574104 594 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL365400.2-201ENST00000605604 902 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC005840.5-201ENST00000619166 599 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC123767.1-202ENST00000620407 817 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC015908.5-201ENST00000623289 343 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC068787.1-201ENST00000623908 691 ntBASIC5.34□□□□□ -1.55
CCDC38Q502W7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CCDC38Q502W7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC38Q502W7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC38Q502W7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 RNU6-224P-201ENST00000384055 107 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 MIR105-1-201ENST00000385222 81 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 RN7SKP59-201ENST00000410520 314 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AL513325.1-201ENST00000417716 1034 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC027644.1-201ENST00000419595 298 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CHEK2P5-201ENST00000423877 246 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 MTCYBP32-201ENST00000427945 1084 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC38Q502W7 CLUHP1-201ENST00000435012 1190 ntBASIC5.33□□□□□ -1.56
CCDC38Q502W7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC38Q502W7 Z80107.1-201ENST00000436830 412 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms