Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX4Q33E94 MAPK10-373ENST00000641983 6772 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 AL451142.2-201ENST00000429076 2090 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RFX4Q33E94 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RFX4Q33E94 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 RNU6-670P-201ENST00000364312 104 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 AL607077.1-201ENST00000401718 499 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 HSPD1P16-201ENST00000402302 394 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 RNA5SP113-201ENST00000410486 84 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AC016831.4-201ENST00000438302 307 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 FHP1-201ENST00000442741 703 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.11□□□□□ -1.75
RFX4Q33E94 EIF4A1P11-201ENST00000451239 222 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 HMGN1P8-201ENST00000463578 288 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 RPL7P16-201ENST00000479738 738 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 OR5M14P-201ENST00000506803 618 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.11□□□□□ -1.75
RFX4Q33E94 RN7SKP276-201ENST00000516242 268 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AC090281.1-201ENST00000523019 276 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.11□□□□□ -1.75
RFX4Q33E94 SOX5P1-201ENST00000524155 1127 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AL110118.1-201ENST00000553543 400 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.11□□□□□ -1.75
RFX4Q33E94 MTATP6P25-201ENST00000574491 261 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.11□□□□□ -1.75
RFX4Q33E94 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.11□□□□□ -1.75
RFX4Q33E94 U3.53-201ENST00000628922 216 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 AC010329.2-201ENST00000595195 2737 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
RFX4Q33E94 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RFX4Q33E94 KARSP3-201ENST00000571212 1504 ntBASIC4.11□□□□□ -1.75
RFX4Q33E94 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX4Q33E94 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX4Q33E94 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 CPHL1P-201ENST00000461341 3407 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 MIR365B-201ENST00000362317 111 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 DHFRP5-201ENST00000406944 564 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.1□□□□□ -1.75
RFX4Q33E94 COX6B1P1-201ENST00000415962 213 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 ARAFP1-201ENST00000422172 605 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 MTND4LP13-201ENST00000425022 298 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC022022.1-201ENST00000430304 178 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX4Q33E94 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX4Q33E94 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.1□□□□□ -1.75
RFX4Q33E94 AC012671.1-201ENST00000451912 203 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX4Q33E94 C1DP3-201ENST00000455013 423 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC110749.1-201ENST00000462007 357 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC022336.1-201ENST00000475510 337 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC004453.1-201ENST00000487895 408 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 OR52A4P-203ENST00000498233 1014 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC083829.1-201ENST00000503756 657 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RFX4Q33E94 AC007016.1-201ENST00000512110 244 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.1□□□□□ -1.75
RFX4Q33E94 RNU2-30P-201ENST00000516209 141 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC068446.3-201ENST00000555285 382 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.1□□□□□ -1.75
RFX4Q33E94 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.1□□□□□ -1.75
RFX4Q33E94 OR1F2P-201ENST00000570470 933 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.1□□□□□ -1.75
RFX4Q33E94 AC008536.1-201ENST00000602872 669 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC018445.2-201ENST00000622987 260 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC008785.1-201ENST00000624475 456 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.1□□□□□ -1.75
RFX4Q33E94 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFX4Q33E94 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RFX4Q33E94 MTCO1P8-201ENST00000416914 1523 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 AC108467.2-201ENST00000617640 1597 ntBASIC4.1□□□□□ -1.75
RFX4Q33E94 NOL8P1-201ENST00000508336 3529 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms