Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
FOXF1Q12946 MIR6758-201ENST00000620653 63 ntBASIC3.85□□□□□ -1.79
FOXF1Q12946 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXF1Q12946 AC067931.1-201ENST00000624190 671 ntBASIC3.85□□□□□ -1.79
FOXF1Q12946 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
FOXF1Q12946 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 AC027290.2-201ENST00000623210 18662 ntBASIC3.85□□□□□ -1.79
FOXF1Q12946 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXF1Q12946 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
FOXF1Q12946 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
FOXF1Q12946 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.85□□□□□ -1.79
FOXF1Q12946 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXF1Q12946 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXF1Q12946 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXF1Q12946 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 MIR383-201ENST00000362257 73 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 RNA5SP52-201ENST00000362448 134 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 RNA5SP366-201ENST00000365454 123 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL161909.1-201ENST00000397390 712 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AL035696.2-201ENST00000407941 709 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXF1Q12946 GAPDHP49-201ENST00000421421 961 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 RPS12P5-201ENST00000423449 371 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL450263.2-201ENST00000439400 589 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 AC009963.2-201ENST00000453431 138 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 UQCRHP4-201ENST00000471686 272 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AC106806.2-201ENST00000509365 500 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 HPRT1P1-201ENST00000509498 657 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 PGBD4P4-201ENST00000509673 613 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXF1Q12946 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AC069240.1-201ENST00000548774 375 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AC027176.2-201ENST00000559166 746 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL139395.1-201ENST00000603662 160 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AL669942.2-201ENST00000620352 697 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AP001005.3-201ENST00000622049 129 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 AC006840.1-201ENST00000623069 542 ntBASIC3.84□□□□□ -1.79
FOXF1Q12946 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.84□□□□□ -1.79
FOXF1Q12946 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.84□□□□□ -1.79
FOXF1Q12946 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
FOXF1Q12946 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.84□□□□□ -1.79
FOXF1Q12946 NOL8P1-201ENST00000508336 3529 ntBASIC3.84□□□□□ -1.8
FOXF1Q12946 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
FOXF1Q12946 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
FOXF1Q12946 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.84□□□□□ -1.8
FOXF1Q12946 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
FOXF1Q12946 Z82217.1-201ENST00000625157 8149 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXF1Q12946 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXF1Q12946 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
FOXF1Q12946 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
FOXF1Q12946 RPL32P3-201ENST00000359025 275 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXF1Q12946 OR6C69P-201ENST00000394268 893 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AC233289.1-201ENST00000403700 508 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXF1Q12946 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXF1Q12946 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
FOXF1Q12946 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXF1Q12946 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXF1Q12946 MAPRE1P3-201ENST00000435438 796 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXF1Q12946 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXF1Q12946 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXF1Q12946 RPL5P30-201ENST00000465511 891 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AF213884.1-201ENST00000488102 463 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AC026979.1-201ENST00000492525 396 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 PPM1AP1-201ENST00000502740 1135 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
FOXF1Q12946 AC138409.2-202ENST00000507274 458 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 PARP4P3-201ENST00000510265 317 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 KCTD9P2-201ENST00000512203 1013 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 RNA5SP73-201ENST00000516744 108 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 HIGD1AP5-201ENST00000529959 259 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AC105233.3-201ENST00000531125 744 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.83□□□□□ -1.8
FOXF1Q12946 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.83□□□□□ -1.8
FOXF1Q12946 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.83□□□□□ -1.8
FOXF1Q12946 MTND6P33-201ENST00000571794 183 ntBASIC3.83□□□□□ -1.8
FOXF1Q12946 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms