Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.6□□□□□ -1.51
COL16A1Q07092 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 AC006011.1-201ENST00000442758 349 ntBASIC5.6□□□□□ -1.51
COL16A1Q07092 SCARNA14-201ENST00000516903 136 ntBASIC5.6□□□□□ -1.51
COL16A1Q07092 CYCSP30-201ENST00000546447 172 ntBASIC5.6□□□□□ -1.51
COL16A1Q07092 AC091178.1-203ENST00000584586 279 ntBASIC5.6□□□□□ -1.51
COL16A1Q07092 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
COL16A1Q07092 AC243654.2-201ENST00000612843 443 ntBASIC5.6□□□□□ -1.51
COL16A1Q07092 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.6□□□□□ -1.51
COL16A1Q07092 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL16A1Q07092 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
COL16A1Q07092 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.6□□□□□ -1.51
COL16A1Q07092 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
COL16A1Q07092 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL16A1Q07092 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL16A1Q07092 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL16A1Q07092 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL16A1Q07092 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL16A1Q07092 TRIM60P17-201ENST00000415181 719 ntBASIC5.59□□□□□ -1.51
COL16A1Q07092 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.59□□□□□ -1.51
COL16A1Q07092 RPS29P19-201ENST00000479709 171 ntBASIC5.59□□□□□ -1.51
COL16A1Q07092 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.59□□□□□ -1.51
COL16A1Q07092 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.59□□□□□ -1.51
COL16A1Q07092 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.59□□□□□ -1.51
COL16A1Q07092 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.59□□□□□ -1.51
COL16A1Q07092 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.59□□□□□ -1.51
COL16A1Q07092 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL16A1Q07092 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL16A1Q07092 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.59□□□□□ -1.51
COL16A1Q07092 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL16A1Q07092 AL359922.3-201ENST00000624779 1670 ntBASIC5.59□□□□□ -1.51
COL16A1Q07092 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.59□□□□□ -1.51
COL16A1Q07092 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL16A1Q07092 Y_RNA.500-201ENST00000384466 111 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 AL080315.1-201ENST00000406055 466 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 MIR1289-1-201ENST00000408836 144 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 HSPD1P21-201ENST00000436541 245 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.59□□□□□ -1.52
COL16A1Q07092 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.59□□□□□ -1.52
COL16A1Q07092 RPL7P22-201ENST00000466005 733 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 PRELID3BP6-201ENST00000503839 571 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.59□□□□□ -1.52
COL16A1Q07092 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.59□□□□□ -1.52
COL16A1Q07092 AC097486.1-201ENST00000515331 210 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 RN7SKP57-201ENST00000517248 293 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COL16A1Q07092 AC005344.1-201ENST00000613391 459 ntBASIC5.59□□□□□ -1.52
COL16A1Q07092 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
COL16A1Q07092 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
COL16A1Q07092 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.59□□□□□ -1.52
COL16A1Q07092 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 A2MP1-204ENST00000566278 4130 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL16A1Q07092 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 MIR128-1-201ENST00000384921 82 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 RN7SKP167-201ENST00000411047 285 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.58□□□□□ -1.52
COL16A1Q07092 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.58□□□□□ -1.52
COL16A1Q07092 AL591363.1-201ENST00000450091 483 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.58□□□□□ -1.52
COL16A1Q07092 VN1R32P-201ENST00000452234 905 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.58□□□□□ -1.52
COL16A1Q07092 AC015726.1-201ENST00000602353 681 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 AC115621.1-201ENST00000604653 858 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 AC092354.2-201ENST00000607786 514 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 MIR6868-201ENST00000611215 58 ntBASIC5.58□□□□□ -1.52
COL16A1Q07092 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.58□□□□□ -1.52
COL16A1Q07092 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL16A1Q07092 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL16A1Q07092 EIF1P3-201ENST00000423841 334 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.57□□□□□ -1.52
COL16A1Q07092 FCF1P7-201ENST00000451185 558 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 AC106707.2-201ENST00000484182 374 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 SETP14-201ENST00000497538 873 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.57□□□□□ -1.52
COL16A1Q07092 SUMO2P19-201ENST00000518920 295 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.57□□□□□ -1.52
COL16A1Q07092 AL352979.3-201ENST00000553515 247 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.57□□□□□ -1.52
COL16A1Q07092 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.57□□□□□ -1.52
COL16A1Q07092 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.57□□□□□ -1.52
COL16A1Q07092 PRELID3BP3-201ENST00000584963 545 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.57□□□□□ -1.52
COL16A1Q07092 AC011816.2-201ENST00000607089 556 ntBASIC5.57□□□□□ -1.52
COL16A1Q07092 OR6C71P-202ENST00000641886 1107 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms