Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 RNU1-32P-201ENST00000363937 159 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.92□□□□□ -1.78
H3F3AP84243 AL732292.1-201ENST00000426692 226 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 RPEP2-201ENST00000432149 701 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 AL132765.1-201ENST00000434165 553 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.92□□□□□ -1.78
H3F3AP84243 AC099063.2-201ENST00000446360 662 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 RPS27AP15-201ENST00000447672 466 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 Z95152.1-201ENST00000453556 656 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 RN7SL98P-201ENST00000462271 300 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 RPS26P28-201ENST00000470806 348 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 RN7SL459P-201ENST00000481078 302 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 ATP1B1P1-201ENST00000509767 915 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.92□□□□□ -1.78
H3F3AP84243 Z98200.1-201ENST00000607298 470 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.92□□□□□ -1.78
H3F3AP84243 AL669942.2-201ENST00000620352 697 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 BMS1P21-201ENST00000634565 365 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.92□□□□□ -1.78
H3F3AP84243 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AC139713.2-214ENST00000642059 1811 ntBASIC3.92□□□□□ -1.78
H3F3AP84243 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
H3F3AP84243 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.92□□□□□ -1.78
H3F3AP84243 ASNSP1-201ENST00000518311 1939 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 VPS35P1-201ENST00000563400 1518 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 MIR331-201ENST00000362302 94 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 RNU4-39P-201ENST00000362455 127 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 RPS20P14-201ENST00000412545 360 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 SNRPFP1-201ENST00000414761 252 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 RPS12P5-201ENST00000423449 371 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.91□□□□□ -1.78
H3F3AP84243 AC023141.6-201ENST00000429418 337 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 NFYAP1-201ENST00000431953 972 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.91□□□□□ -1.78
H3F3AP84243 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 PSMC1P13-201ENST00000458195 985 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.91□□□□□ -1.78
H3F3AP84243 RPS27AP16-201ENST00000492222 470 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 PGBD4P4-201ENST00000509673 613 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 VWA8P1-201ENST00000510889 176 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.91□□□□□ -1.78
H3F3AP84243 AC010476.1-201ENST00000519111 851 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 MTND6P33-201ENST00000571794 183 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
H3F3AP84243 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 AC113403.1-201ENST00000604910 193 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 AL021997.2-201ENST00000615674 271 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.91□□□□□ -1.78
H3F3AP84243 MIR7641-1-201ENST00000627518 61 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
H3F3AP84243 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 EIF2AP4-201ENST00000424793 1781 ntBASIC3.91□□□□□ -1.78
H3F3AP84243 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
H3F3AP84243 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
H3F3AP84243 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
H3F3AP84243 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.9□□□□□ -1.78
H3F3AP84243 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.9□□□□□ -1.78
H3F3AP84243 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
H3F3AP84243 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
H3F3AP84243 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
H3F3AP84243 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
H3F3AP84243 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
H3F3AP84243 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
H3F3AP84243 AC090017.1-201ENST00000548612 1779 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 SNORA56-201ENST00000383966 129 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H3F3AP84243 U3.22-201ENST00000391120 215 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC093719.1-202ENST00000392735 373 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 RPL12P34-201ENST00000424532 479 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 DNAJC19P7-201ENST00000428811 344 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.9□□□□□ -1.79
H3F3AP84243 RPS29P17-201ENST00000430795 166 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC011998.1-201ENST00000433403 117 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.9□□□□□ -1.79
H3F3AP84243 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms