Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H3AP68431 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HIST1H3AP68431 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HIST1H3AP68431 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HIST1H3AP68431 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC008033.1-201ENST00000216407 1162 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 OR5P1P-201ENST00000299512 925 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 RPS16P5-201ENST00000406501 404 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 MIR1911-201ENST00000410783 80 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 SNRPFP1-201ENST00000414761 252 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 GAPDHP49-201ENST00000421421 961 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL356387.2-201ENST00000422272 243 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL158073.1-201ENST00000426848 1104 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 LYPLA1P1-201ENST00000434514 622 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 MTND2P2-201ENST00000434633 945 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL162388.1-201ENST00000450912 352 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC079804.1-201ENST00000461922 436 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL352979.3-201ENST00000553515 247 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 MTND2P13-201ENST00000577438 1039 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 VN1R81P-201ENST00000602085 372 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC100827.5-201ENST00000615883 426 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 AC007546.1-201ENST00000619452 559 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 FP325313.1-201ENST00000638228 703 ntBASIC3.82□□□□□ -1.8
HIST1H3AP68431 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H3AP68431 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HIST1H3AP68431 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 RNU6-984P-201ENST00000363236 109 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 SNORA11F-201ENST00000408237 128 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 GSTM3P2-201ENST00000412746 530 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 DYNLL1P7-201ENST00000429273 258 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 AL132765.1-201ENST00000434165 553 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 AL772161.1-201ENST00000439130 476 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 ARL2BPP10-201ENST00000446487 531 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 RPL21P126-201ENST00000470049 478 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC090281.1-201ENST00000523019 276 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 OR8G5-201ENST00000524943 1041 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC008638.3-201ENST00000603341 463 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.81□□□□□ -1.8
HIST1H3AP68431 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HIST1H3AP68431 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.81□□□□□ -1.8
HIST1H3AP68431 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HIST1H3AP68431 AC012618.3-205ENST00000637896 1496 ntBASIC3.8□□□□□ -1.8
HIST1H3AP68431 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HIST1H3AP68431 AP000756.2-201ENST00000624168 2567 ntBASIC3.8□□□□□ -1.8
HIST1H3AP68431 AC068254.2-201ENST00000623938 3577 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms