Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TRIM51DP-201ENST00000529746 596 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.08□□□□□ -1.6
SUMO3P55854 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC090515.3-201ENST00000560431 315 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC110743.1-201ENST00000584870 478 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC008521.2-201ENST00000591021 259 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.08□□□□□ -1.6
SUMO3P55854 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC110760.3-201ENST00000598794 467 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 DUXAP11-201ENST00000603858 526 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC004948.1-201ENST00000609858 672 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 AL354976.1-201ENST00000613843 387 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 AC122133.1-201ENST00000613964 233 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 XPOTP1-201ENST00000443317 2398 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 AC107027.3-201ENST00000565095 3473 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.08□□□□□ -1.6
SUMO3P55854 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.08□□□□□ -1.6
SUMO3P55854 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.08□□□□□ -1.6
SUMO3P55854 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SUMO3P55854 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 MTND4P34-201ENST00000572715 1371 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
SUMO3P55854 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SUMO3P55854 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SUMO3P55854 RN7SKP185-201ENST00000362813 326 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 BMS1P3-201ENST00000372011 932 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SUMO3P55854 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SUMO3P55854 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
SUMO3P55854 RNU11-201ENST00000387069 134 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SUMO3P55854 MIR1302-8-201ENST00000408342 128 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 RN7SKP286-201ENST00000410894 299 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.07□□□□□ -1.6
SUMO3P55854 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 AC092634.6-201ENST00000418558 192 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC008280.1-201ENST00000418851 412 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 MTCO3P1-205ENST00000422088 832 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AL133173.1-201ENST00000423458 397 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 IPMKP1-201ENST00000425988 855 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 RPS26P47-201ENST00000427219 348 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 B3GNT2P1-201ENST00000434960 952 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 HMGN1P36-201ENST00000446623 298 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AL450023.1-201ENST00000450868 751 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC082651.2-201ENST00000496833 166 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC147055.4-201ENST00000504399 745 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 XKRY-201ENST00000510392 1100 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 OR5BM1P-201ENST00000512021 366 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 SNORA48.10-201ENST00000516965 160 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 ARL2BPP5-201ENST00000523141 481 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
SUMO3P55854 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.07□□□□□ -1.6
SUMO3P55854 MRPS21P7-201ENST00000566937 238 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.07□□□□□ -1.6
SUMO3P55854 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 NF1P5-201ENST00000588287 448 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 AL360012.1-201ENST00000602813 131 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.07□□□□□ -1.6
SUMO3P55854 AC124312.4-201ENST00000605533 310 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.07□□□□□ -1.6
SUMO3P55854 AL139124.1-201ENST00000609123 421 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.07□□□□□ -1.6
SUMO3P55854 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC008115.3-201ENST00000614874 549 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC004943.3-201ENST00000624116 600 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 AC010608.2-201ENST00000624830 470 ntBASIC5.07□□□□□ -1.6
SUMO3P55854 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms