Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL12P48061 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL12P48061 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CXCL12P48061 AC106871.1-201ENST00000568324 3102 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 AC006042.3-201ENST00000454684 1469 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 AL583835.1-201ENST00000399570 407 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL12P48061 RPL37P1-201ENST00000432310 284 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 GOT2P5-201ENST00000433995 546 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 VN1R32P-201ENST00000452234 905 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL12P48061 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL12P48061 RPL35AP15-201ENST00000468042 339 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 RNA5SP73-201ENST00000516744 108 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL12P48061 EIF4EP5-201ENST00000528228 640 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.33□□□□□ -1.72
CXCL12P48061 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 AL356121.2-201ENST00000624715 780 ntBASIC4.33□□□□□ -1.72
CXCL12P48061 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
CXCL12P48061 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CXCL12P48061 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CXCL12P48061 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CXCL12P48061 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL12P48061 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 MIR449B-201ENST00000384995 97 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 TCEA1P4-201ENST00000415066 844 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 OR6C64P-201ENST00000419708 825 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 EIF1P3-201ENST00000423841 334 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 RPL23AP25-201ENST00000430973 463 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 AC013410.1-201ENST00000436223 1232 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 AL133547.1-201ENST00000448546 220 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 RHEBP2-201ENST00000450289 600 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL12P48061 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 EIF2S2P5-201ENST00000457635 968 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 USP9YP2-201ENST00000504503 1000 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 USP9YP1-201ENST00000513521 1002 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 RNU6-1334P-201ENST00000516032 105 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 OR10D4P-201ENST00000525892 951 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.32□□□□□ -1.72
CXCL12P48061 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.32□□□□□ -1.72
CXCL12P48061 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.32□□□□□ -1.72
CXCL12P48061 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL12P48061 AC015912.2-201ENST00000571053 181 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 MIR5685-201ENST00000579080 79 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AP005262.1-201ENST00000582646 997 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.32□□□□□ -1.72
CXCL12P48061 AC130352.1-201ENST00000602979 661 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AC008966.2-201ENST00000606157 453 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL12P48061 AC039056.2-201ENST00000622261 511 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 AL445363.3-201ENST00000623080 671 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.32□□□□□ -1.72
CXCL12P48061 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CXCL12P48061 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CXCL12P48061 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CXCL12P48061 OR4G1P-202ENST00000641173 1788 ntBASIC4.32□□□□□ -1.72
CXCL12P48061 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.32□□□□□ -1.72
CXCL12P48061 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL12P48061 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CXCL12P48061 TCP1P3-201ENST00000414406 1498 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.31□□□□□ -1.72
CXCL12P48061 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL12P48061 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL12P48061 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.31□□□□□ -1.72
CXCL12P48061 RNA5SP187-201ENST00000384400 119 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CXCL12P48061 SETP15-201ENST00000412724 337 ntBASIC4.31□□□□□ -1.72
CXCL12P48061 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms