Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEDD4P46934 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NEDD4P46934 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
NEDD4P46934 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD4P46934 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD4P46934 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NEDD4P46934 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NEDD4P46934 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NEDD4P46934 RNU6-1331P-201ENST00000363658 106 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
NEDD4P46934 MIR7-1-201ENST00000384871 110 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AL161909.1-201ENST00000397390 712 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 RN7SKP235-201ENST00000410662 305 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 RNU6-564P-201ENST00000410983 104 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 RPL23AP26-201ENST00000412728 464 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC017078.1-201ENST00000416146 368 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.07□□□□□ -1.6
NEDD4P46934 AC007064.3-201ENST00000422608 359 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 TRIM60P13-201ENST00000432350 1283 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.07□□□□□ -1.6
NEDD4P46934 NPM1P33-201ENST00000438918 872 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 RPL35P6-201ENST00000490024 372 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 CEACAMP10-202ENST00000495431 496 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC010374.1-201ENST00000503762 1237 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC108475.1-201ENST00000507880 950 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC092593.2-201ENST00000513866 913 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 RNA5SP49-201ENST00000516450 115 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
NEDD4P46934 AL109766.1-201ENST00000555080 552 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 FAM60CP-201ENST00000591086 664 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AC025175.1-201ENST00000606482 759 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 AL138721.1-201ENST00000616756 179 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NEDD4P46934 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.07□□□□□ -1.6
NEDD4P46934 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NEDD4P46934 AC068254.2-201ENST00000623938 3577 ntBASIC5.07□□□□□ -1.6
NEDD4P46934 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD4P46934 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEDD4P46934 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NEDD4P46934 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 RNU1-14P-201ENST00000362759 152 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 RNA5SP366-201ENST00000365454 123 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 VN1R8P-201ENST00000407739 893 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AC098592.2-201ENST00000413158 265 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 MTCO1P57-201ENST00000432182 261 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 RSL24D1P8-201ENST00000434442 492 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.06□□□□□ -1.6
NEDD4P46934 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 ABCF2P2-201ENST00000450549 296 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 C1DP3-201ENST00000455013 423 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 RN7SL860P-201ENST00000473738 223 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 RPS26P24-201ENST00000497656 331 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AC138409.2-202ENST00000507274 458 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 AC087272.1-201ENST00000523624 533 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD4P46934 CYCSP29-201ENST00000533731 318 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.06□□□□□ -1.6
NEDD4P46934 AC008759.1-201ENST00000589783 983 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 ARF4P1-201ENST00000605447 541 ntBASIC5.06□□□□□ -1.6
NEDD4P46934 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NEDD4P46934 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.06□□□□□ -1.6
NEDD4P46934 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEDD4P46934 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
NEDD4P46934 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.06□□□□□ -1.6
NEDD4P46934 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD4P46934 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NEDD4P46934 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
NEDD4P46934 AC067945.1-201ENST00000342609 618 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 OR6C69P-201ENST00000394268 893 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC007068.1-201ENST00000396690 844 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AL607077.1-201ENST00000401718 499 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.05□□□□□ -1.6
NEDD4P46934 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.05□□□□□ -1.6
NEDD4P46934 GSTM3P2-201ENST00000412746 530 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 UBTFL3-201ENST00000418934 1024 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC234779.1-201ENST00000425910 285 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.05□□□□□ -1.6
NEDD4P46934 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NEDD4P46934 EIF2S2P5-201ENST00000457635 968 ntBASIC5.05□□□□□ -1.6
NEDD4P46934 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.05□□□□□ -1.6
NEDD4P46934 UBTFL6-201ENST00000477929 1024 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms