Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NKX2-1P43699 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX2-1P43699 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NKX2-1P43699 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.15□□□□□ -1.74
NKX2-1P43699 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 RNA5SP90-201ENST00000364801 99 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NKX2-1P43699 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 MTCO1P56-201ENST00000401674 224 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 RPL31P52-201ENST00000407532 367 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC092638.1-201ENST00000411966 1275 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC019050.1-201ENST00000418508 492 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC093155.2-201ENST00000420734 937 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 RPS3P2-201ENST00000421346 701 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 GAPDHP49-201ENST00000421421 961 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 RPL21P110-201ENST00000433345 446 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 TMX2P1-201ENST00000436507 708 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 RPS29P10-201ENST00000439197 166 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 PTGES3P1-201ENST00000439531 483 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL009048.1-201ENST00000450437 298 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 RPL7P61-201ENST00000451721 751 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL445433.1-201ENST00000457507 257 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 OR52A4P-201ENST00000472867 958 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC104689.1-201ENST00000473356 768 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 MTND6P6-201ENST00000478031 263 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 RN7SL441P-201ENST00000492388 296 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC093720.1-201ENST00000505681 714 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 IGBP1P5-201ENST00000507524 1000 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 Y_RNA.717-201ENST00000517106 92 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC104417.1-201ENST00000523974 751 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC005868.1-201ENST00000536421 331 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL049872.1-201ENST00000556323 322 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 ZNF971P-201ENST00000562068 1249 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC116553.2-201ENST00000564203 463 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL445435.1-201ENST00000604232 665 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC100767.2-201ENST00000604840 693 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 SNORD91B-202ENST00000608459 222 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC008115.3-201ENST00000614874 549 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 MIR6778-201ENST00000617912 73 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC109454.4-201ENST00000623411 649 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC097520.1-201ENST00000624435 385 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL121594.5-201ENST00000631724 573 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.15□□□□□ -1.75
NKX2-1P43699 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NKX2-1P43699 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.75
NKX2-1P43699 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.15□□□□□ -1.75
NKX2-1P43699 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC021242.1-201ENST00000507315 2035 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NKX2-1P43699 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
NKX2-1P43699 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 AC092747.4-201ENST00000620519 1861 ntBASIC4.14□□□□□ -1.75
NKX2-1P43699 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-1P43699 ANKRD36P1-201ENST00000344424 659 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms