Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RPL7P44-201ENST00000424827 742 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.77□□□□□ -1.33
LIG1P18858 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.77□□□□□ -1.33
LIG1P18858 FAM96AP1-201ENST00000430879 482 ntBASIC6.77□□□□□ -1.33
LIG1P18858 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.77□□□□□ -1.33
LIG1P18858 PNKDP1-201ENST00000435914 430 ntBASIC6.77□□□□□ -1.33
LIG1P18858 ATP5LP2-201ENST00000440646 311 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 HMGB1P16-201ENST00000447155 540 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 RFC5P1-201ENST00000454419 874 ntBASIC6.77□□□□□ -1.33
LIG1P18858 DNAJC19P1-201ENST00000455312 319 ntBASIC6.77□□□□□ -1.33
LIG1P18858 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 AC068228.1-201ENST00000461723 211 ntBASIC6.77□□□□□ -1.33
LIG1P18858 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 AC117522.1-201ENST00000509821 380 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC018442.3-201ENST00000523025 183 ntBASIC6.77□□□□□ -1.33
LIG1P18858 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.77□□□□□ -1.33
LIG1P18858 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 AC006115.2-201ENST00000596823 202 ntBASIC6.77□□□□□ -1.33
LIG1P18858 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 AC079315.1-201ENST00000602952 623 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC112230.1-201ENST00000604342 547 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AL022154.1-201ENST00000604698 785 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC112220.3-201ENST00000605502 502 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC008945.2-201ENST00000606056 604 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AP005137.2-201ENST00000609238 400 ntBASIC6.77□□□□□ -1.33
LIG1P18858 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.77□□□□□ -1.33
LIG1P18858 AC007742.2-201ENST00000618226 398 ntBASIC6.77□□□□□ -1.33
LIG1P18858 AC012414.7-202ENST00000622705 1090 ntBASIC6.77□□□□□ -1.33
LIG1P18858 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.77□□□□□ -1.33
LIG1P18858 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.77□□□□□ -1.33
LIG1P18858 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LIG1P18858 CASC19-260ENST00000641828 2001 ntBASIC6.77□□□□□ -1.33
LIG1P18858 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.77□□□□□ -1.33
LIG1P18858 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LIG1P18858 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LIG1P18858 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
LIG1P18858 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
LIG1P18858 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
LIG1P18858 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 ELF2P3-201ENST00000445099 1506 ntBASIC6.76□□□□□ -1.33
LIG1P18858 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 AP005435.3-201ENST00000531260 3198 ntBASIC6.76□□□□□ -1.33
LIG1P18858 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIG1P18858 ENSAP3-201ENST00000312710 333 ntBASIC6.76□□□□□ -1.33
LIG1P18858 MIR133A2-201ENST00000347538 102 ntBASIC6.76□□□□□ -1.33
LIG1P18858 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIG1P18858 SNORA21-201ENST00000362423 132 ntBASIC6.76□□□□□ -1.33
LIG1P18858 Y_RNA.813-201ENST00000364639 102 ntBASIC6.76□□□□□ -1.33
LIG1P18858 RNA5SP211-201ENST00000365516 117 ntBASIC6.76□□□□□ -1.33
LIG1P18858 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 RNU6-348P-201ENST00000384386 107 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.76□□□□□ -1.33
LIG1P18858 NMD3P2-201ENST00000421815 761 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 AC130360.1-201ENST00000425489 1117 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 HMGB3P10-201ENST00000434734 572 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 LARP1BP3-201ENST00000437229 869 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 COX6CP12-201ENST00000446748 202 ntBASIC6.76□□□□□ -1.33
LIG1P18858 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 AC016027.4-201ENST00000450866 277 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.76□□□□□ -1.33
LIG1P18858 OR9M1P-201ENST00000459641 921 ntBASIC6.76□□□□□ -1.33
LIG1P18858 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.76□□□□□ -1.33
LIG1P18858 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.76□□□□□ -1.33
LIG1P18858 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 Y_RNA.702-201ENST00000516843 96 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 AC130365.2-201ENST00000525882 1201 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIG1P18858 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIG1P18858 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.76□□□□□ -1.33
LIG1P18858 CYCSP38-201ENST00000559840 322 ntBASIC6.76□□□□□ -1.33
LIG1P18858 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.76□□□□□ -1.33
LIG1P18858 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.76□□□□□ -1.33
LIG1P18858 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms