Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.92□□□□□ -1.62
PDGFRAP16234 MIR6820-201ENST00000611508 62 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 MIR6853-201ENST00000619642 74 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 AL359757.1-201ENST00000623176 255 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFRAP16234 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDGFRAP16234 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PDGFRAP16234 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.92□□□□□ -1.62
PDGFRAP16234 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDGFRAP16234 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFRAP16234 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC010928.1-201ENST00000592477 1447 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PDGFRAP16234 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC105402.1-201ENST00000413336 545 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 BX510359.2-201ENST00000417920 305 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC048351.1-201ENST00000420064 602 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 FABP7P1-201ENST00000424004 391 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AL390879.2-203ENST00000426943 1121 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC073508.1-201ENST00000428866 656 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 RPL7P48-201ENST00000461513 746 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC011005.3-201ENST00000491624 395 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC025768.1-201ENST00000510057 267 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 RNU2-30P-201ENST00000516209 141 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFRAP16234 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC063949.1-201ENST00000552900 865 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC068446.3-201ENST00000555285 382 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC068714.1-201ENST00000559623 800 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 HMGB3P26-201ENST00000560051 582 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 NPM1P47-201ENST00000560843 856 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AL109741.3-201ENST00000561748 592 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFRAP16234 RNF138P2-201ENST00000603490 592 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AC098935.2-201ENST00000604222 466 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC012618.3-205ENST00000637896 1496 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 AL031119.1-201ENST00000404707 1879 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFRAP16234 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFRAP16234 AC015813.6-201ENST00000624409 5808 ntBASIC4.91□□□□□ -1.62
PDGFRAP16234 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.9□□□□□ -1.62
PDGFRAP16234 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PDGFRAP16234 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFRAP16234 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFRAP16234 AL133268.1-201ENST00000405676 1401 ntBASIC4.9□□□□□ -1.62
PDGFRAP16234 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFRAP16234 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFRAP16234 AL590240.1-201ENST00000334118 313 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 AC010385.1-201ENST00000412374 256 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC019070.1-201ENST00000415008 1024 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFRAP16234 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 BX119904.1-201ENST00000432026 348 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 RPL34P6-201ENST00000432390 345 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC016831.4-201ENST00000438302 307 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC074367.1-201ENST00000438685 1125 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFRAP16234 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFRAP16234 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFRAP16234 RPL23AP23-201ENST00000452590 471 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 RPS29P22-201ENST00000472363 168 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 METTL15P1-201ENST00000481421 1045 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFRAP16234 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 RN7SL346P-201ENST00000491561 294 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC010627.1-201ENST00000503819 1294 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFRAP16234 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFRAP16234 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFRAP16234 AC123786.2-201ENST00000603459 275 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 IMMP1LP1-201ENST00000605170 488 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 uc_338.9-201ENST00000617424 182 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 PHKBP1-201ENST00000450951 1951 ntBASIC4.9□□□□□ -1.63
PDGFRAP16234 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms