Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR9M1P-201ENST00000459641 921 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 RN7SKP141-201ENST00000516167 338 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 IGKV2D-19-201ENST00000523346 262 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.17□□□□□ -1.26
TOP2AP11388 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.17□□□□□ -1.26
TOP2AP11388 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC7.17□□□□□ -1.26
TOP2AP11388 OR4F13P-201ENST00000428478 931 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 RPL23AP65-201ENST00000475608 468 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 AL139099.1-201ENST00000497398 403 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TOP2AP11388 AC006499.5-201ENST00000505037 514 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 NDUFA5P2-201ENST00000519723 344 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.17□□□□□ -1.26
TOP2AP11388 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.17□□□□□ -1.26
TOP2AP11388 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.17□□□□□ -1.26
TOP2AP11388 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
TOP2AP11388 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TOP2AP11388 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TOP2AP11388 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOP2AP11388 ARL4AP4-201ENST00000434170 518 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 AL031584.1-201ENST00000447169 754 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AC092691.2-201ENST00000461787 803 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AL591473.1-201ENST00000464297 313 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AC138938.1-201ENST00000515431 782 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 PAICSP4-201ENST00000517543 1253 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 AC005255.1-201ENST00000593748 216 ntBASIC7.16□□□□□ -1.26
TOP2AP11388 CCT7-217ENST00000626868 249 ntTSL 5 BASIC7.16□□□□□ -1.26
TOP2AP11388 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
TOP2AP11388 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOP2AP11388 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.15□□□□□ -1.26
TOP2AP11388 AL137918.1-201ENST00000624542 1922 ntBASIC7.15□□□□□ -1.26
TOP2AP11388 AC021242.1-201ENST00000507315 2035 ntBASIC7.15□□□□□ -1.26
TOP2AP11388 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TOP2AP11388 AC005261.2-201ENST00000593427 4258 ntBASIC7.15□□□□□ -1.26
TOP2AP11388 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
TOP2AP11388 U1.1-201ENST00000384101 164 ntBASIC7.15□□□□□ -1.27
TOP2AP11388 HMGB3P19-201ENST00000403971 560 ntBASIC7.15□□□□□ -1.27
TOP2AP11388 AC083863.1-201ENST00000438811 231 ntBASIC7.15□□□□□ -1.27
TOP2AP11388 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.15□□□□□ -1.27
TOP2AP11388 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TOP2AP11388 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.15□□□□□ -1.27
TOP2AP11388 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.15□□□□□ -1.27
TOP2AP11388 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TOP2AP11388 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.15□□□□□ -1.27
TOP2AP11388 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
TOP2AP11388 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TOP2AP11388 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 SNORA57.3-201ENST00000411095 141 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC7.14□□□□□ -1.27
TOP2AP11388 AC108022.1-201ENST00000493466 478 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AC110768.1-201ENST00000509222 400 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.14□□□□□ -1.27
TOP2AP11388 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.14□□□□□ -1.27
TOP2AP11388 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.14□□□□□ -1.27
TOP2AP11388 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC7.14□□□□□ -1.27
TOP2AP11388 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.14□□□□□ -1.27
TOP2AP11388 AC007179.3-201ENST00000604976 235 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AC084757.4-201ENST00000616350 526 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AC015871.5-202ENST00000623252 701 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 AF001550.2-201ENST00000636643 217 ntBASIC7.14□□□□□ -1.27
TOP2AP11388 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TOP2AP11388 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TOP2AP11388 PRELID3BP10-201ENST00000431957 584 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.13□□□□□ -1.27
TOP2AP11388 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.13□□□□□ -1.27
TOP2AP11388 DSTNP2-201ENST00000504533 515 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.13□□□□□ -1.27
TOP2AP11388 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.13□□□□□ -1.27
TOP2AP11388 AP000619.3-201ENST00000535634 1127 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 AC012468.1-201ENST00000604888 430 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 AL049634.3-201ENST00000604968 457 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 AC064801.1-201ENST00000612025 407 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 AC073530.2-201ENST00000623987 261 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TOP2AP11388 AC233968.1-201ENST00000611212 1300 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TOP2AP11388 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TOP2AP11388 AL513548.1-201ENST00000562904 1724 ntBASIC7.13□□□□□ -1.27
TOP2AP11388 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
TOP2AP11388 AL590704.1-201ENST00000402856 794 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.12□□□□□ -1.27
TOP2AP11388 SYF2P2-201ENST00000417620 583 ntBASIC7.12□□□□□ -1.27
TOP2AP11388 AC068533.1-201ENST00000418542 415 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms