Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RN7SKP267-201ENST00000410381 285 ntBASIC3.78□□□□□ -1.8
CD74P04233 RN7SKP213-201ENST00000410746 298 ntBASIC3.78□□□□□ -1.8
CD74P04233 TRIM60P17-201ENST00000415181 719 ntBASIC3.78□□□□□ -1.8
CD74P04233 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 MTND2P11-201ENST00000423638 648 ntBASIC3.78□□□□□ -1.8
CD74P04233 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 GSTA7P-201ENST00000438425 448 ntBASIC3.78□□□□□ -1.8
CD74P04233 SUMO2P1-206ENST00000445436 284 ntBASIC3.78□□□□□ -1.8
CD74P04233 OR7L1P-201ENST00000456181 380 ntBASIC3.78□□□□□ -1.8
CD74P04233 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 SYT14P1-201ENST00000481459 721 ntBASIC3.78□□□□□ -1.8
CD74P04233 IGLV2-34-201ENST00000490007 283 ntBASIC3.78□□□□□ -1.8
CD74P04233 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 GAPDHP56-201ENST00000506031 988 ntBASIC3.78□□□□□ -1.8
CD74P04233 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.78□□□□□ -1.8
CD74P04233 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.78□□□□□ -1.8
CD74P04233 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.78□□□□□ -1.8
CD74P04233 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 RN7SL652P-201ENST00000577769 300 ntBASIC3.78□□□□□ -1.8
CD74P04233 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 AC138473.1-201ENST00000605717 526 ntBASIC3.78□□□□□ -1.8
CD74P04233 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.78□□□□□ -1.8
CD74P04233 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.78□□□□□ -1.8
CD74P04233 AL035461.2-201ENST00000619201 524 ntBASIC3.78□□□□□ -1.8
CD74P04233 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.78□□□□□ -1.8
CD74P04233 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CD74P04233 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.78□□□□□ -1.8
CD74P04233 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
CD74P04233 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CD74P04233 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CD74P04233 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 CPHL1P-201ENST00000461341 3407 ntBASIC3.77□□□□□ -1.81
CD74P04233 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 RNA5SP502-201ENST00000362694 119 ntBASIC3.77□□□□□ -1.81
CD74P04233 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 JKAMPP1-201ENST00000413804 919 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC140479.3-201ENST00000418944 1126 ntBASIC3.77□□□□□ -1.81
CD74P04233 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 AC006455.6-201ENST00000426192 893 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC010733.1-201ENST00000451515 401 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.77□□□□□ -1.81
CD74P04233 SEPT7P6-201ENST00000469999 1143 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.77□□□□□ -1.81
CD74P04233 AC008953.1-201ENST00000497334 318 ntBASIC3.77□□□□□ -1.81
CD74P04233 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.77□□□□□ -1.81
CD74P04233 AC004980.4-201ENST00000513375 203 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 AC008676.3-201ENST00000521237 435 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC135001.1-201ENST00000544546 283 ntBASIC3.77□□□□□ -1.81
CD74P04233 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.77□□□□□ -1.81
CD74P04233 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.77□□□□□ -1.81
CD74P04233 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.77□□□□□ -1.81
CD74P04233 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 AC090953.1-201ENST00000604305 1092 ntBASIC3.77□□□□□ -1.81
CD74P04233 AL160290.3-201ENST00000604869 165 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC010200.2-201ENST00000605098 235 ntBASIC3.77□□□□□ -1.81
CD74P04233 Z98200.1-201ENST00000607298 470 ntBASIC3.77□□□□□ -1.81
CD74P04233 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC233309.1-201ENST00000619522 751 ntBASIC3.77□□□□□ -1.81
CD74P04233 AC019278.1-201ENST00000623516 479 ntBASIC3.77□□□□□ -1.81
CD74P04233 USP9YP4-201ENST00000424401 1745 ntBASIC3.77□□□□□ -1.81
CD74P04233 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.77□□□□□ -1.81
CD74P04233 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
CD74P04233 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CD74P04233 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CD74P04233 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.76□□□□□ -1.81
CD74P04233 AC018555.1-201ENST00000567548 1980 ntBASIC3.76□□□□□ -1.81
CD74P04233 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CD74P04233 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.76□□□□□ -1.81
CD74P04233 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms