Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNA5SP22-201ENST00000365393 109 ntBASIC4.59□□□□□ -1.67
APOEP02649 RNU1-44P-201ENST00000384453 163 ntBASIC4.59□□□□□ -1.67
APOEP02649 MIR3065-201ENST00000390137 79 ntBASIC4.59□□□□□ -1.67
APOEP02649 RPL23AP59-201ENST00000399415 461 ntBASIC4.59□□□□□ -1.67
APOEP02649 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
APOEP02649 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.59□□□□□ -1.67
APOEP02649 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
APOEP02649 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
APOEP02649 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.59□□□□□ -1.67
APOEP02649 AC009220.1-201ENST00000451614 275 ntBASIC4.59□□□□□ -1.67
APOEP02649 RN7SL98P-201ENST00000462271 300 ntBASIC4.59□□□□□ -1.67
APOEP02649 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.59□□□□□ -1.67
APOEP02649 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 AP002981.1-201ENST00000517692 975 ntBASIC4.59□□□□□ -1.67
APOEP02649 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 AC018442.3-201ENST00000523025 183 ntBASIC4.59□□□□□ -1.67
APOEP02649 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.59□□□□□ -1.67
APOEP02649 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 AC007066.2-202ENST00000566531 914 ntBASIC4.59□□□□□ -1.67
APOEP02649 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
APOEP02649 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 AC067838.1-201ENST00000606064 577 ntBASIC4.59□□□□□ -1.67
APOEP02649 AC015813.4-201ENST00000610469 179 ntBASIC4.59□□□□□ -1.67
APOEP02649 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
APOEP02649 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.59□□□□□ -1.67
APOEP02649 RMST_9.1-201ENST00000619945 193 ntBASIC4.59□□□□□ -1.67
APOEP02649 AC011266.1-201ENST00000624119 3569 ntBASIC4.59□□□□□ -1.67
APOEP02649 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.58□□□□□ -1.68
APOEP02649 AC074029.4-201ENST00000624796 1859 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC090017.1-201ENST00000548612 1779 ntBASIC4.58□□□□□ -1.68
APOEP02649 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.58□□□□□ -1.68
APOEP02649 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
APOEP02649 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 AC008033.1-201ENST00000216407 1162 ntBASIC4.58□□□□□ -1.68
APOEP02649 RNU4-39P-201ENST00000362455 127 ntBASIC4.58□□□□□ -1.68
APOEP02649 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
APOEP02649 MIR141-201ENST00000384975 95 ntBASIC4.58□□□□□ -1.68
APOEP02649 U3.22-201ENST00000391120 215 ntBASIC4.58□□□□□ -1.68
APOEP02649 AL732292.1-201ENST00000426692 226 ntBASIC4.58□□□□□ -1.68
APOEP02649 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.58□□□□□ -1.68
APOEP02649 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC114495.1-201ENST00000441274 436 ntBASIC4.58□□□□□ -1.68
APOEP02649 RPL7P33-201ENST00000444159 742 ntBASIC4.58□□□□□ -1.68
APOEP02649 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.58□□□□□ -1.68
APOEP02649 DHFRP3-201ENST00000455595 559 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.58□□□□□ -1.68
APOEP02649 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.58□□□□□ -1.68
APOEP02649 NDUFA5P9-201ENST00000472609 340 ntBASIC4.58□□□□□ -1.68
APOEP02649 CEACAMP10-202ENST00000495431 496 ntBASIC4.58□□□□□ -1.68
APOEP02649 PGBD4P4-201ENST00000509673 613 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.58□□□□□ -1.68
APOEP02649 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.58□□□□□ -1.68
APOEP02649 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
APOEP02649 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.58□□□□□ -1.68
APOEP02649 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.58□□□□□ -1.68
APOEP02649 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.58□□□□□ -1.68
APOEP02649 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.58□□□□□ -1.68
APOEP02649 AL159169.2-201ENST00000610061 1269 ntBASIC4.58□□□□□ -1.68
APOEP02649 uc_338.13-201ENST00000618243 179 ntBASIC4.58□□□□□ -1.68
APOEP02649 MIR6891-201ENST00000618788 93 ntBASIC4.58□□□□□ -1.68
APOEP02649 MIR7154-201ENST00000620673 73 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC007546.2-201ENST00000623996 360 ntBASIC4.58□□□□□ -1.68
APOEP02649 AP002967.1-201ENST00000624203 539 ntBASIC4.58□□□□□ -1.68
APOEP02649 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.58□□□□□ -1.68
APOEP02649 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
APOEP02649 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.58□□□□□ -1.68
APOEP02649 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
APOEP02649 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
APOEP02649 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
APOEP02649 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
APOEP02649 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.57□□□□□ -1.68
APOEP02649 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
APOEP02649 OR4K17-201ENST00000315543 1032 ntBASIC4.57□□□□□ -1.68
APOEP02649 RNA5SP307-201ENST00000362863 116 ntBASIC4.57□□□□□ -1.68
APOEP02649 RNA5SP509-201ENST00000364577 119 ntBASIC4.57□□□□□ -1.68
APOEP02649 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
APOEP02649 AL078604.1-201ENST00000404609 466 ntBASIC4.57□□□□□ -1.68
APOEP02649 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
APOEP02649 HMGB1P32-201ENST00000425971 565 ntBASIC4.57□□□□□ -1.68
APOEP02649 AC023141.6-201ENST00000429418 337 ntBASIC4.57□□□□□ -1.68
APOEP02649 CDY14P-201ENST00000431260 1014 ntBASIC4.57□□□□□ -1.68
APOEP02649 AL132765.1-201ENST00000434165 553 ntBASIC4.57□□□□□ -1.68
APOEP02649 UBE2V1P3-201ENST00000439651 417 ntBASIC4.57□□□□□ -1.68
APOEP02649 CDY12P-201ENST00000440679 1015 ntBASIC4.57□□□□□ -1.68
APOEP02649 CDY13P-201ENST00000445813 1015 ntBASIC4.57□□□□□ -1.68
APOEP02649 EIF2S2P2-201ENST00000447161 982 ntBASIC4.57□□□□□ -1.68
APOEP02649 CDY23P-201ENST00000451661 1014 ntBASIC4.57□□□□□ -1.68
APOEP02649 AC011276.1-201ENST00000469688 323 ntBASIC4.57□□□□□ -1.68
APOEP02649 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
APOEP02649 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.57□□□□□ -1.68
APOEP02649 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms