Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN9O95484 AC099336.2-201ENST00000422457 254 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 RNF19BPX-201ENST00000426224 625 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC006466.1-201ENST00000438721 289 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 RPL36AP15-201ENST00000444514 266 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 CLIC4P1-201ENST00000453177 535 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC099560.2-201ENST00000457554 255 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 RPL12P20-201ENST00000475538 479 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN9O95484 STMN1P2-201ENST00000508435 439 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC021146.7-201ENST00000509604 775 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC034244.2-201ENST00000514668 858 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLDN9O95484 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN9O95484 AC133552.5-201ENST00000604266 540 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AL353600.1-201ENST00000608148 251 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC005021.1-201ENST00000608730 355 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC073342.3-201ENST00000624211 193 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 AC055839.1-201ENST00000634467 498 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN9O95484 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN9O95484 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN9O95484 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
CLDN9O95484 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 SPATA2P1-201ENST00000431223 2055 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLDN9O95484 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN9O95484 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 RNU6-152P-201ENST00000384037 107 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 SNORA74C-2-201ENST00000411179 201 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 RBMY2KP-201ENST00000418221 992 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 RPS26P47-201ENST00000427219 348 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AP001324.1-201ENST00000428553 399 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AL359265.2-201ENST00000434367 631 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AL606490.8-201ENST00000441624 319 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AL353898.1-201ENST00000444055 238 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AL162591.2-201ENST00000449634 317 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 CCDC75P1-201ENST00000469247 791 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AC008694.2-201ENST00000517591 306 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN9O95484 AP001781.1-201ENST00000530977 207 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 OR5D15P-201ENST00000531671 942 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN9O95484 AC068714.1-201ENST00000559623 800 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AC074050.1-201ENST00000563247 211 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN9O95484 MIR4270-201ENST00000581799 70 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 RN7SL690P-201ENST00000582087 240 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN9O95484 AL160290.3-201ENST00000604869 165 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AL133243.1-201ENST00000614487 366 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AC023509.5-201ENST00000617434 807 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 AC006065.6-201ENST00000625201 545 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN9O95484 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN9O95484 OR2L1P-202ENST00000641567 1023 ntBASIC4.31□□□□□ -1.72
CLDN9O95484 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CLDN9O95484 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.31□□□□□ -1.72
CLDN9O95484 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN9O95484 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 HSPD1P11-201ENST00000508643 1702 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 SNORD113.2-201ENST00000364166 89 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 CYB5AP4-201ENST00000396692 399 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 AL035419.1-201ENST00000397037 564 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 RPS24P12-201ENST00000402084 394 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN9O95484 BTF3P9-201ENST00000418784 283 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN9O95484 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN9O95484 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN9O95484 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 CEACAMP6-201ENST00000452007 574 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN9O95484 RPS27AP17-201ENST00000463344 455 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 METTL15P1-201ENST00000481421 1045 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN9O95484 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CLDN9O95484 CDH12P2-201ENST00000504393 298 ntBASIC4.3□□□□□ -1.72
CLDN9O95484 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms