Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPL21P18-201ENST00000469899 480 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 MTND4LP31-201ENST00000514859 294 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AP000827.1-201ENST00000527814 258 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 LRRC34P1-201ENST00000542742 915 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RAPGEF3O95398 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AL132857.1-201ENST00000555180 708 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AL022067.1-201ENST00000602426 454 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 AP001267.4-201ENST00000602598 545 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC093424.1-201ENST00000604999 338 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC097065.2-201ENST00000608159 533 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 AC068057.2-201ENST00000624047 895 ntBASIC7.08□□□□□ -1.28
RAPGEF3O95398 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RAPGEF3O95398 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
RAPGEF3O95398 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RAPGEF3O95398 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RAPGEF3O95398 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.08□□□□□ -1.28
RAPGEF3O95398 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 5S_rRNA.1-201ENST00000364415 116 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 SNORA71.2-201ENST00000364941 134 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 RNU6-796P-201ENST00000391086 107 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 AL590762.2-201ENST00000395798 571 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 MTATP6P20-201ENST00000414147 562 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 SETP9-201ENST00000423837 832 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RAPGEF3O95398 MTND2P5-201ENST00000432656 1006 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 H2AFZP5-201ENST00000446960 382 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 RPL7L1P8-201ENST00000469911 741 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 METTL15P1-201ENST00000481421 1045 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 AC106734.1-201ENST00000568646 663 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 SNORA74C-1-201ENST00000580726 201 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 AP000676.4-201ENST00000624659 623 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 RNF123-214ENST00000629802 207 ntTSL 5 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.07□□□□□ -1.28
RAPGEF3O95398 AC005261.4-201ENST00000600047 1385 ntBASIC7.07□□□□□ -1.28
RAPGEF3O95398 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 RNU1-132P-201ENST00000364300 164 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 OR1L6-202ENST00000373684 1044 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 RNU6-481P-201ENST00000384194 107 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 QRSL1P2-201ENST00000418582 964 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 RFPL4AP3-201ENST00000515267 345 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 RNU6-276P-201ENST00000516114 96 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AP000916.1-201ENST00000533869 835 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC008126.1-201ENST00000549019 480 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC022884.2-201ENST00000578535 580 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC099785.1-201ENST00000605697 437 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC093673.2-201ENST00000609674 331 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 MIR6133-201ENST00000617057 108 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC005618.4-201ENST00000625053 554 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 AC132825.7-201ENST00000638744 335 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RAPGEF3O95398 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 DDX18P6-201ENST00000450119 1997 ntBASIC7.06□□□□□ -1.28
RAPGEF3O95398 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RAPGEF3O95398 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 ABCC13-202ENST00000463099 3842 ntBASIC7.05□□□□□ -1.28
RAPGEF3O95398 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RAPGEF3O95398 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RAPGEF3O95398 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms