Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM38O00635 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM38O00635 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM38O00635 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM38O00635 MTCO1P56-201ENST00000401674 224 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AL589647.1-201ENST00000402485 466 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 TAF13P2-201ENST00000416876 286 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 RBMY2KP-201ENST00000418221 992 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 AC007161.1-204ENST00000423039 460 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 RPL7AP49-201ENST00000429522 581 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 RPL7P34-201ENST00000433316 712 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AL591438.1-201ENST00000433508 581 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 GTF2IP3-201ENST00000433887 494 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 VN1R54P-201ENST00000435210 1049 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 YWHAQP9-201ENST00000445891 512 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 RPL23AP71-201ENST00000470966 469 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC079203.1-201ENST00000487972 404 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 AC016559.2-201ENST00000510759 359 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 AC093752.1-206ENST00000511823 336 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 AC092709.1-201ENST00000521355 1045 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM38O00635 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM38O00635 LSM3P2-201ENST00000551246 273 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM38O00635 AL132857.1-201ENST00000555180 708 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 RPL10P14-201ENST00000565265 298 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC090751.1-201ENST00000566966 267 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 OR1F2P-201ENST00000570470 933 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 MTCO1P40-201ENST00000574371 625 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 MIR4646-201ENST00000580775 63 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AC006116.3-201ENST00000592968 361 ntBASIC5.34□□□□□ -1.55
TRIM38O00635 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.34□□□□□ -1.55
TRIM38O00635 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM38O00635 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM38O00635 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
TRIM38O00635 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
TRIM38O00635 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM38O00635 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
TRIM38O00635 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.34□□□□□ -1.56
TRIM38O00635 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM38O00635 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM38O00635 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC104446.1-201ENST00000613728 1321 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AL118496.1-201ENST00000440201 1812 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TRIM38O00635 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 PPIAP9-201ENST00000403866 498 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC016907.1-201ENST00000419483 435 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC099336.2-201ENST00000422457 254 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 RPL7P56-201ENST00000429441 717 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 UBE2V1P1-201ENST00000430836 445 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM38O00635 KCTD10P1-201ENST00000434203 625 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.33□□□□□ -1.56
TRIM38O00635 RPS7P5-201ENST00000441482 581 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 DNAJC19P8-201ENST00000452887 259 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM38O00635 BX248409.1-201ENST00000455497 255 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC099560.2-201ENST00000457554 255 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM38O00635 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC093720.1-201ENST00000505681 714 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC091860.1-201ENST00000505723 432 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 NDUFB5P1-201ENST00000508134 564 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM38O00635 AC008562.1-201ENST00000521763 330 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 COX6B1P6-201ENST00000522347 255 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 OR8A2P-201ENST00000528631 952 ntBASIC5.33□□□□□ -1.56
TRIM38O00635 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms