Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL391684.1-202ENST00000641293 1636 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC105074.1-201ENST00000623380 3095 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RAD1P1-201ENST00000231383 813 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 SNORA55-201ENST00000364587 135 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 LIPT1P1-201ENST00000415870 1186 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC140479.3-201ENST00000418944 1126 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL30P3-201ENST00000424262 333 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC108075.1-201ENST00000424692 529 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC093655.2-201ENST00000425735 631 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 FMO7P-201ENST00000436045 768 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 H2AFZP5-201ENST00000446960 382 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC000111.2-201ENST00000448200 210 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL935212.3-201ENST00000450729 284 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL7AP52-201ENST00000458096 790 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU6-1218P-201ENST00000458990 108 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 snoU13.20-201ENST00000459180 104 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC092754.2-201ENST00000463506 460 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010683.1-201ENST00000473673 378 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL222P-201ENST00000476452 299 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL97P-201ENST00000486780 299 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL244P-201ENST00000493405 297 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC018797.1-201ENST00000510791 255 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 Y_RNA.667-201ENST00000516212 107 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP438-201ENST00000516561 112 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP340-201ENST00000517132 107 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC131935.1-201ENST00000524621 333 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 OR10G5P-201ENST00000532733 358 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 HCG18-243ENST00000602498 327 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010424.2-201ENST00000607594 443 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC005156.1-201ENST00000613371 573 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC099669.2-201ENST00000616549 437 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AC015722.2-201ENST00000622210 551 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 AL031119.1-201ENST00000404707 1879 ntBASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.32□□□□□ -2.04
CHKB-CPT1BH3BT56 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SRP72P2-201ENST00000344851 1979 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 COX6B1P3-201ENST00000312310 260 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 OR4A15-201ENST00000314706 1035 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP307-201ENST00000362863 116 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU6-304P-201ENST00000364855 107 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SNORA67-201ENST00000384423 137 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AL590762.2-201ENST00000395798 571 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 CXADRP1-201ENST00000398098 1095 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RBBP4P5-201ENST00000398583 1266 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL31P52-201ENST00000407532 367 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AF186996.5-201ENST00000418098 904 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RAD23BP1-201ENST00000421404 1227 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL21P109-201ENST00000422213 475 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TRIAP1P1-201ENST00000427062 225 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 ATP5HP2-201ENST00000433885 485 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms