Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC008536.1-201ENST00000602872 669 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC021755.4-201ENST00000616620 456 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 SCARNA15-201ENST00000607520 4325 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 Z95331.1-201ENST00000623075 23112 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
TCRBV7S3A2A0A539 SMG1P4-204ENST00000523028 4131 ntBASIC4.96□□□□□ -1.61
TCRBV7S3A2A0A539 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
TCRBV7S3A2A0A539 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
TCRBV7S3A2A0A539 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
TCRBV7S3A2A0A539 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AL034370.1-201ENST00000397254 1590 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RPL23P2-201ENST00000320371 421 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RNU6-353P-201ENST00000364266 108 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RNU6-224P-201ENST00000384055 107 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 Y_RNA.578-201ENST00000390903 88 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AL035419.1-201ENST00000397037 564 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MTND4P13-201ENST00000402078 1023 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 SNORA11.5-201ENST00000408163 128 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 YWHAEP5-201ENST00000431545 765 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RPL7P29-201ENST00000437151 728 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 CNOT7P2-201ENST00000441051 832 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 TDGF1P1-201ENST00000445734 527 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MTATP6P26-201ENST00000445926 662 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RNA5SP103-201ENST00000459503 118 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RNU7-140P-201ENST00000459546 60 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 HPRT1P2-201ENST00000505250 544 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC119751.5-201ENST00000514077 770 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 RN7SKP260-201ENST00000516907 149 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AP001636.2-201ENST00000525517 696 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AL049839.1-201ENST00000556151 657 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MIR4489-201ENST00000578869 62 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC011447.4-201ENST00000587562 111 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 AC011453.2-201ENST00000603737 729 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 MEMO1P5-201ENST00000604810 406 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 U6.107-201ENST00000637108 79 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 BX649567.1-201ENST00000642071 1134 ntBASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TCRBV7S3A2A0A539 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 RNU1-87P-201ENST00000363727 170 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 SNORD116-12-201ENST00000384468 92 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 U3.35-201ENST00000408405 208 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 BTF3P8-201ENST00000414577 526 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 AC005033.1-201ENST00000428904 813 ntBASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.95□□□□□ -1.62
TCRBV7S3A2A0A539 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms