Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC016588.2-201ENST00000632484 3021 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 SNORD113.2-201ENST00000364166 89 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 SNORA70F-201ENST00000384142 135 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 MTND2P11-201ENST00000423638 648 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 RPS26P47-201ENST00000427219 348 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 MTCO1P51-201ENST00000427672 1060 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 RPL23AP93-201ENST00000440847 484 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 HMGB1P16-201ENST00000447155 540 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC073264.2-201ENST00000448886 166 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AL513533.1-201ENST00000453728 415 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC090013.1-201ENST00000485147 480 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC146944.2-203ENST00000502493 354 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC139495.1-202ENST00000513164 354 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC068790.7-201ENST00000602347 528 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC021106.3-201ENST00000623925 531 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AC017007.4-201ENST00000503353 1352 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 NXPH1-205ENST00000602349 1953 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 OR4K15-201ENST00000305051 1216 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC067945.1-201ENST00000342609 618 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 RNU1-63P-201ENST00000383902 164 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC093719.1-202ENST00000392735 373 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 RBMY2KP-201ENST00000418221 992 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 UQCRBP1-201ENST00000421129 336 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 CENPIP1-201ENST00000425713 902 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AL353597.2-202ENST00000434901 373 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 RPS27AP15-201ENST00000447672 466 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC012671.1-201ENST00000451912 203 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 CEACAMP6-201ENST00000452007 574 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC092905.1-201ENST00000467527 949 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC105918.1-201ENST00000474399 838 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 PRELID3BP7-201ENST00000503606 469 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AP001781.1-201ENST00000530977 207 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC063949.1-201ENST00000552900 865 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC090515.3-201ENST00000560431 315 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC069061.3-201ENST00000582254 823 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC103792.1-201ENST00000603591 919 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC233309.1-201ENST00000619522 751 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AC006065.6-201ENST00000625201 545 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 AL627171.1-201ENST00000618845 1308 ntBASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DRB4X5D2U9 DHX40P1-201ENST00000588725 1412 ntBASIC3.34□□□□□ -1.88
HLA-DRB4X5D2U9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HLA-DRB4X5D2U9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DRB4X5D2U9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms