Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 Y_RNA.255-201ENST00000364581 97 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 MIR99A-201ENST00000384906 81 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 U3.23-201ENST00000391132 200 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC008171.1-201ENST00000395058 200 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AL591416.1-201ENST00000404015 867 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 BEND7P1-201ENST00000422058 457 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 LYPLA1P1-201ENST00000434514 622 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 CBX1P4-201ENST00000439415 457 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 RPL12P49-201ENST00000441100 121 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 SDHCP3-201ENST00000445371 506 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC104651.2-201ENST00000447549 528 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 RPL7P22-201ENST00000466005 733 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC034222.1-201ENST00000494052 532 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 MINOS1P4-201ENST00000515470 318 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC104986.1-201ENST00000517978 436 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 CARSP2-201ENST00000520688 277 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 OR4R1P-201ENST00000529879 463 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 OR5M6P-201ENST00000530227 937 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 BNIP3P6-201ENST00000549284 499 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 HSPE1P2-201ENST00000554777 306 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 FRG2DP-202ENST00000566967 323 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC006270.2-201ENST00000578523 652 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC063962.1-201ENST00000608199 521 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AL355472.4-201ENST00000610233 626 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC037198.3-201ENST00000616754 526 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC009318.4-201ENST00000620496 486 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 CASC19-204ENST00000641001 2055 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 AC132219.2-201ENST00000624416 2327 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB11Q9Y5F2 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB11Q9Y5F2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB11Q9Y5F2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB11Q9Y5F2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC013488.1-201ENST00000526618 1838 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC005839.1-201ENST00000624148 3213 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC011592.1-201ENST00000624647 3634 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 RNU6-639P-201ENST00000384074 107 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SKP146-201ENST00000410242 334 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC245054.2-201ENST00000415639 319 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 FAM183DP-201ENST00000421987 399 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 DUTP6-201ENST00000425573 462 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 MTCO3P21-201ENST00000430791 643 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 FTLP17-201ENST00000432567 525 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC010881.1-201ENST00000433830 235 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AC002381.1-201ENST00000447049 280 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 HMGB1P7-201ENST00000450921 612 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AL034369.1-201ENST00000453808 477 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 PPP1R2P5-201ENST00000457256 603 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 RN7SL492P-201ENST00000460700 295 ntBASIC6.83□□□□□ -1.32
PCDHB11Q9Y5F2 APOOP2-201ENST00000461561 539 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms