Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF90P1-201ENST00000480493 1951 ntBASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
PDZRN3Q9UPQ7 AL049634.1-201ENST00000453770 1720 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC067945.1-201ENST00000342609 618 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-702P-201ENST00000364982 107 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 Y_RNA.579-201ENST00000390939 94 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL365400.1-201ENST00000431854 640 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL645936.1-201ENST00000441979 518 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 RPL7P31-201ENST00000450192 724 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 PPIAP27-201ENST00000453800 265 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 NXT1P1-201ENST00000458481 316 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 RPL15P21-201ENST00000495592 567 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 KHDC1P1-201ENST00000511053 508 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 SAP18P1-201ENST00000512058 390 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC025678.1-201ENST00000567861 338 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL136363.1-201ENST00000605349 337 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC009268.2-201ENST00000621925 457 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC015722.2-201ENST00000622210 551 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC129778.1-202ENST00000623812 261 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC090617.10-201ENST00000624308 134 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL591379.1-207ENST00000635982 261 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AL590763.1-201ENST00000398297 1545 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 AC114546.3-201ENST00000623582 1734 ntBASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.17□□□□□ -1.1
PDZRN3Q9UPQ7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 SNORA51.1-201ENST00000363243 140 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-43P-201ENST00000384302 107 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 SNORA17A-201ENST00000391185 133 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 TAF9BP1-201ENST00000396646 746 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 MIR548M-201ENST00000408260 86 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC096741.1-201ENST00000472250 846 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 FTH1P9-201ENST00000513251 355 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 PRMT5P1-201ENST00000514351 598 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-430P-201ENST00000517078 107 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AP003122.3-201ENST00000526316 255 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC243972.3-201ENST00000539655 198 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC073916.1-201ENST00000545095 130 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 MIR4307-201ENST00000582802 84 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC092266.1-201ENST00000610958 165 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC109309.2-201ENST00000612597 332 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 MLECP1-201ENST00000615893 709 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 TCL6_3.1-201ENST00000619064 137 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 MRPL57P1-201ENST00000621486 265 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 RMST_7.1-201ENST00000621935 268 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 SNORA17.5-201ENST00000630429 132 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LINC02495-203ENST00000636704 242 ntBASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms