Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RNU6-236P-201ENST00000363886 106 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RNU6-171P-201ENST00000384354 107 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC009804.1-201ENST00000400949 179 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AL390774.1-201ENST00000411924 246 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AL355433.1-201ENST00000422804 300 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 HIGD1AP4-201ENST00000430194 280 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 FAM96AP1-201ENST00000430879 482 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 CYCSP12-201ENST00000437729 300 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RPS29P10-201ENST00000439197 166 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 CYCSP24-201ENST00000445119 316 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC068135.1-201ENST00000446164 246 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RPS4XP1-201ENST00000482189 787 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 BX510359.5-201ENST00000515651 304 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 SNORA70.11-201ENST00000515987 138 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 SNORA70.13-201ENST00000516116 138 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 MTCYBP28-201ENST00000566728 1132 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC005951.1-201ENST00000576706 485 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 MIR1269B-201ENST00000580405 75 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC025588.2-201ENST00000604851 466 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC107952.2-201ENST00000606048 486 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AL121594.5-201ENST00000631724 573 ntBASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEMA4BQ9NPR2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC235565.1-201ENST00000456962 1325 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 RNU6-1339P-201ENST00000363574 91 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 SNORD116-8-201ENST00000384365 95 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC119751.3-201ENST00000399720 670 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 RN7SKP278-201ENST00000410504 342 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 GSTM3P2-201ENST00000412746 530 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC246680.2-201ENST00000422106 389 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 OR5AW1P-201ENST00000426334 1006 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 UBE2V1P1-201ENST00000430836 445 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 TRY2P-201ENST00000448860 689 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 ZNF886P-201ENST00000450781 723 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 RPL10P17-201ENST00000453852 316 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC005229.2-201ENST00000456995 399 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC005912.1-201ENST00000495392 255 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC010285.3-201ENST00000511668 676 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 Y_RNA.688-201ENST00000516565 95 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC012400.1-201ENST00000518452 381 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC125611.1-201ENST00000549563 229 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 ZNF321P-202ENST00000550843 495 ntBASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.04□□□□□ -1.6
SEMA4BQ9NPR2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms