Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL138955.1-201ENST00000622881 1040 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AP000943.4-201ENST00000622912 357 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 AC021106.3-201ENST00000623925 531 ntBASIC4.76□□□□□ -1.65
SIX2Q9NPC8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SIX2Q9NPC8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AL353692.2-201ENST00000407054 335 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 MIR1911-201ENST00000410783 80 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 RPS20P14-201ENST00000412545 360 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 RANP4-201ENST00000413361 655 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 RBMY2KP-201ENST00000418221 992 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC007563.3-201ENST00000433233 371 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC006326.1-201ENST00000445465 787 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC073264.2-201ENST00000448886 166 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 CCRL1P1-201ENST00000449542 1053 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 MTND2P6-201ENST00000455337 1030 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 DHFRP3-201ENST00000455595 559 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 PSMC1P13-201ENST00000458195 985 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 MTCO1P31-201ENST00000506355 492 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC138409.2-202ENST00000507274 458 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC093770.1-201ENST00000511559 571 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 RNA5SP497-201ENST00000516081 97 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AP006289.1-201ENST00000538089 277 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC133794.1-201ENST00000602731 914 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AL592494.3-201ENST00000609485 464 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC245389.2-201ENST00000616023 576 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC242843.1-201ENST00000618702 573 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC007546.1-201ENST00000619452 559 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AC083843.3-201ENST00000623679 2186 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SIX2Q9NPC8 AL592148.3-201ENST00000608771 2646 ntBASIC4.75□□□□□ -1.65
SIX2Q9NPC8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL132640.2-201ENST00000559968 1698 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 NAMPTP1-201ENST00000440465 2514 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 RAD17P1-201ENST00000418130 2042 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL022322.2-201ENST00000624072 20397 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 OR4K17-201ENST00000315543 1032 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 RNU6-792P-201ENST00000363490 107 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 RNU6-650P-201ENST00000365658 111 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL035419.1-201ENST00000397037 564 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC097374.1-203ENST00000400783 485 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 RN7SKP216-201ENST00000411050 312 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC245517.2-201ENST00000442890 346 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 VN1R32P-201ENST00000452234 905 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 STMN1P2-201ENST00000508435 439 ntBASIC4.74□□□□□ -1.65
SIX2Q9NPC8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX2Q9NPC8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms