Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
VPS13AQ96RL7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4□□□□□ -1.77
VPS13AQ96RL7 SNORA74C-2-201ENST00000411179 201 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 ATP5A1P2-201ENST00000412323 255 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 CYCSP53-201ENST00000455540 265 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC021660.1-201ENST00000465006 554 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4□□□□□ -1.77
VPS13AQ96RL7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 CYCSP30-201ENST00000546447 172 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC005034.4-201ENST00000603612 899 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC4□□□□□ -1.77
VPS13AQ96RL7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4□□□□□ -1.77
VPS13AQ96RL7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
VPS13AQ96RL7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 AC007066.1-201ENST00000392902 381 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 RPL7P58-201ENST00000402913 758 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 RPL35AP21-201ENST00000437667 333 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 ZFRP1-201ENST00000457579 2970 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4□□□□□ -1.77
VPS13AQ96RL7 KRT19P6-201ENST00000510983 209 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 RNU1-30P-201ENST00000606575 163 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 ABBA01000935.2-201ENST00000637477 838 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 AL365361.1-201ENST00000566942 3481 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
VPS13AQ96RL7 AJ239321.1-201ENST00000424255 564 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AL512649.1-201ENST00000428997 581 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 OR52E3P-201ENST00000452083 936 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC4□□□□□ -1.77
VPS13AQ96RL7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4□□□□□ -1.77
VPS13AQ96RL7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 AC007546.2-201ENST00000623996 360 ntBASIC4□□□□□ -1.77
VPS13AQ96RL7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13AQ96RL7 AC023632.6-201ENST00000624338 2177 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 RPS4XP12-201ENST00000461747 709 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC006077.1-201ENST00000604746 343 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 MIR8058-201ENST00000615737 89 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 SNORA48.5-201ENST00000391143 135 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC092691.2-201ENST00000461787 803 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AC106707.2-201ENST00000484182 374 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AL645927.2-201ENST00000618350 349 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 AL359757.2-201ENST00000624309 274 ntBASIC3.99□□□□□ -1.77
VPS13AQ96RL7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13AQ96RL7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 RNU6-301P-201ENST00000384277 107 ntBASIC3.98□□□□□ -1.77
VPS13AQ96RL7 RPL21P91-201ENST00000429231 479 ntBASIC3.98□□□□□ -1.77
VPS13AQ96RL7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 RPL5P23-201ENST00000496040 868 ntBASIC3.98□□□□□ -1.77
VPS13AQ96RL7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 AC093671.1-201ENST00000624981 2929 ntBASIC3.98□□□□□ -1.77
VPS13AQ96RL7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13AQ96RL7 CDY11P-201ENST00000447168 1651 ntBASIC3.98□□□□□ -1.77
VPS13AQ96RL7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms