Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 RN7SKP67-201ENST00000515905 235 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC007494.1-201ENST00000562293 760 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC008945.2-201ENST00000606056 604 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AL158211.4-201ENST00000606988 584 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC092954.2-201ENST00000609103 430 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AP005137.2-201ENST00000609238 400 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC006840.1-201ENST00000623069 542 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC007342.8-201ENST00000623278 678 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 CR381653.2-201ENST00000624041 768 ntBASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNGAP1Q96PV0 AC034229.2-201ENST00000566945 2508 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 SEC63P2-201ENST00000503863 1939 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 MAPK10-270ENST00000641102 3538 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC007066.1-201ENST00000392902 381 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 RPL17P50-201ENST00000396131 546 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC002524.1-201ENST00000411687 547 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 RPS7P13-201ENST00000413955 498 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC009237.5-201ENST00000414271 501 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 RPS26P38-201ENST00000414476 348 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 OR51A5P-201ENST00000415429 942 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC007562.1-201ENST00000421819 517 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 HMGB1P31-201ENST00000437242 427 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 MTATP6P30-201ENST00000443540 664 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC023274.2-201ENST00000445264 521 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 NFU1P2-201ENST00000448700 469 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 FDX1P2-201ENST00000450769 375 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 OR9M1P-201ENST00000459641 921 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 RPS23P6-201ENST00000466136 431 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 SETP14-201ENST00000497538 873 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 IGBP1P1-201ENST00000554337 1009 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AC009101.1-201ENST00000568135 242 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 OR4K7P-201ENST00000580232 945 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 Mico1.1-201ENST00000611698 204 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 AL139099.4-201ENST00000614802 114 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 CU639417.4-201ENST00000623928 207 ntBASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNGAP1Q96PV0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNGAP1Q96PV0 AL449283.1-201ENST00000602631 3403 ntBASIC6.71□□□□□ -1.33
SYNGAP1Q96PV0 TEX21P-201ENST00000447107 1476 ntBASIC6.71□□□□□ -1.33
SYNGAP1Q96PV0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
SYNGAP1Q96PV0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNGAP1Q96PV0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SYNGAP1Q96PV0 AC016583.1-201ENST00000624221 2431 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms