Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 YWHAZP2-201ENST00000440317 728 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AL138878.2-201ENST00000440581 1241 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 GEMIN8P3-201ENST00000445417 720 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 UBTFL6-201ENST00000477929 1024 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC006499.6-201ENST00000511169 607 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC137768.1-201ENST00000549998 553 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC074050.1-201ENST00000563247 211 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC069061.3-201ENST00000582254 823 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AP002360.3-201ENST00000607673 710 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC139769.1-204ENST00000472297 1931 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AL356317.1-201ENST00000396110 1436 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC015813.6-201ENST00000624409 5808 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC067945.1-201ENST00000342609 618 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 SNORA56-201ENST00000383966 129 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 RNU6-398P-201ENST00000384143 109 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 RPS3AP23-201ENST00000401762 784 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 RPL5P19-201ENST00000404228 893 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC062016.2-201ENST00000420950 676 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 RCC2P2-201ENST00000422174 918 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 RPS12P10-201ENST00000427031 377 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 ARL2BPP10-201ENST00000446487 531 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 OR7L1P-201ENST00000456181 380 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC105918.1-201ENST00000474399 838 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 HAUS1P1-201ENST00000505275 832 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AP001781.1-201ENST00000530977 207 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC090181.2-201ENST00000602975 672 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC015922.4-201ENST00000612568 690 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AL133243.1-201ENST00000614487 366 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AL138721.1-201ENST00000616756 179 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AL049536.1-201ENST00000625043 744 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL21A1Q96P44 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
COL21A1Q96P44 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.2□□□□□ -1.74
COL21A1Q96P44 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL21A1Q96P44 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL21A1Q96P44 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 RNA5SP505-201ENST00000364748 108 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 RPS4XP9-201ENST00000405151 780 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 CASKP1-201ENST00000412870 582 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC069213.2-201ENST00000420238 366 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 UQCRBP1-201ENST00000421129 336 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 RAD23BP1-201ENST00000421404 1227 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC093084.1-201ENST00000424233 687 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 HMGB1P32-201ENST00000425971 565 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 EIF2S2P3-201ENST00000428356 999 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 RPL23AP93-201ENST00000440847 484 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 RN7SL205P-201ENST00000490174 284 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL21A1Q96P44 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.19□□□□□ -1.74
COL21A1Q96P44 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms