Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC105105.5-201ENST00000622635 1294 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 LINC00622-201ENST00000562811 1570 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 CPHL1P-201ENST00000461341 3407 ntBASIC4.55□□□□□ -1.68
C9orf72Q96LT7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.55□□□□□ -1.68
C9orf72Q96LT7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 A2MP1-204ENST00000566278 4130 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 RPL5P19-201ENST00000404228 893 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 RPS12P10-201ENST00000427031 377 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC016712.1-201ENST00000431088 378 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC012671.1-201ENST00000451912 203 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 NDUFA5P9-201ENST00000472609 340 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 MTND4LP2-201ENST00000502312 285 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC113398.2-201ENST00000507630 558 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC108043.1-201ENST00000512696 574 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 RPL26P30-202ENST00000602923 645 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC244517.3-201ENST00000616254 1235 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 OR2L1P-202ENST00000641567 1023 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 ZNF137P-201ENST00000456718 1920 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
C9orf72Q96LT7 AC016588.2-201ENST00000632484 3021 ntBASIC4.54□□□□□ -1.68
C9orf72Q96LT7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 ATP5F1P2-201ENST00000398143 760 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 RAB28P1-201ENST00000411517 641 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC004690.1-201ENST00000418216 328 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AL590609.2-201ENST00000421430 368 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC006065.1-201ENST00000422539 802 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 RPS27AP7-201ENST00000422792 455 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 RPL23AP1-201ENST00000428990 471 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 RPL23AP93-201ENST00000440847 484 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 TXNP2-201ENST00000443918 295 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AL162591.2-201ENST00000449634 317 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 SNORA26.10-201ENST00000516427 141 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 NPM1P52-201ENST00000518264 846 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC034205.1-201ENST00000520621 638 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 RPL23AP97-201ENST00000568955 471 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 MIR4284-201ENST00000578924 81 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 MIR4715-201ENST00000584117 79 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC023813.4-201ENST00000607580 580 ntBASIC4.53□□□□□ -1.68
C9orf72Q96LT7 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
C9orf72Q96LT7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.53□□□□□ -1.69
C9orf72Q96LT7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
C9orf72Q96LT7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms