Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 OR11J2P-201ENST00000555298 907 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC044860.2-201ENST00000561005 179 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 MIR3691-201ENST00000578066 90 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC011447.4-201ENST00000587562 111 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC006116.3-201ENST00000592968 361 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VMP1Q96GC9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VMP1Q96GC9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
VMP1Q96GC9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VMP1Q96GC9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 DCAF13P3-201ENST00000561147 1334 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AL603766.1-201ENST00000407763 664 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 UBE2V1P11-201ENST00000411559 285 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 RPS12P23-201ENST00000419579 400 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 EI24P4-201ENST00000423683 1078 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 CEACAMP7-201ENST00000444105 496 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 NOP56P2-201ENST00000447491 769 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AL500527.1-201ENST00000448532 255 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 RN7SL814P-201ENST00000487715 300 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC010374.1-201ENST00000503762 1237 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 VWA8P1-201ENST00000510889 176 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC018797.3-201ENST00000513388 1241 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 RN7SKP283-201ENST00000517197 270 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC105031.1-201ENST00000518550 476 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC007448.1-201ENST00000582714 234 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 NTAN1P1-201ENST00000603150 646 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC011626.1-201ENST00000604710 562 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 SNORD91B-202ENST00000608459 222 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AL118556.2-201ENST00000614375 824 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC099669.2-201ENST00000616549 437 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC118658.2-201ENST00000618697 459 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC015804.1-201ENST00000622935 435 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 HPVC1-201ENST00000629899 1198 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC138393.1-206ENST00000540997 1886 ntBASIC4.83□□□□□ -1.64
VMP1Q96GC9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
VMP1Q96GC9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VMP1Q96GC9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 MTND5P11-201ENST00000511037 1812 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 SNORA74A-201ENST00000364089 198 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
VMP1Q96GC9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VMP1Q96GC9 DDX39BP1-205ENST00000422507 192 ntBASIC4.82□□□□□ -1.64
VMP1Q96GC9 RPL7P57-201ENST00000423238 740 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms