Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 MIR218-2-201ENST00000385006 110 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 ENSAP1-201ENST00000392855 326 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 RPL21P17-201ENST00000397467 475 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 HSPE1P12-201ENST00000412576 301 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 ACTR3P3-201ENST00000480448 893 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 FP236240.3-201ENST00000623061 327 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 Z95114.1-201ENST00000624264 14574 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC016588.2-201ENST00000632484 3021 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 ZNF285B-201ENST00000561698 1767 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 RAB9AP3-201ENST00000412737 573 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 CKS1BP6-201ENST00000424932 240 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 RAB9AP1-201ENST00000449393 573 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC098799.3-201ENST00000506095 438 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 RN7SKP13-201ENST00000515933 244 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 MIR5685-201ENST00000579080 79 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC025175.1-201ENST00000606482 759 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC015914.2-201ENST00000618167 288 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC233289.1-201ENST00000403700 508 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RNU4-6P-201ENST00000410804 122 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 NPM1P26-201ENST00000426339 738 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RPL23AP37-201ENST00000479658 549 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC110792.1-201ENST00000491826 472 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC090312.1-201ENST00000580637 348 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC006065.6-201ENST00000625201 545 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 MIR3651-201ENST00000630427 90 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 Z95327.2-201ENST00000414579 1873 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 BMPR1APS1-201ENST00000403332 1598 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 OR4F13P-201ENST00000428478 931 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RPS26P4-201ENST00000431743 355 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AL445433.1-201ENST00000457507 257 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC107016.1-201ENST00000550463 337 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC015967.1-201ENST00000619893 476 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RNA5SP72-201ENST00000364442 117 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RNA5SP513-201ENST00000364648 118 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RNU6-1279P-201ENST00000383917 103 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 MIR30B-201ENST00000384850 88 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 ARL4AP1-201ENST00000503220 705 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 ATP1B1P1-201ENST00000509767 915 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 RNA5SP73-201ENST00000516744 108 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AL442067.2-201ENST00000614033 363 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 AC073869.7-201ENST00000640874 297 ntBASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.89□□□□□ -1.95
ALMS1Q8TCU4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 RN7SKP182-201ENST00000410772 298 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC115115.1-201ENST00000449927 248 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC090589.1-201ENST00000473109 362 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms