Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC010608.2-201ENST00000624830 470 ntBASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 U6.107-201ENST00000637108 79 ntBASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIMC1Q8NDZ2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 KARSP3-201ENST00000571212 1504 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 SNORA64.1-201ENST00000362600 132 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 RNU6-1339P-201ENST00000363574 91 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 RNU6-236P-201ENST00000363886 106 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 RNA5SP242-201ENST00000364171 118 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 RNU6-178P-201ENST00000384631 104 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL121776.1-201ENST00000429337 372 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 PTGES3P1-201ENST00000439531 483 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 ELOCP10-201ENST00000440624 327 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL592437.1-201ENST00000443781 492 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 TAF9P1-201ENST00000445421 515 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 OR7E116P-201ENST00000448529 957 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 TAF9P2-201ENST00000454958 515 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL161747.1-201ENST00000480068 358 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 OR8A2P-201ENST00000528631 952 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AC090695.1-201ENST00000561269 1222 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 MIR4789-201ENST00000577469 82 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 ELOCP34-201ENST00000604436 327 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 AL137141.1-201ENST00000624622 4836 ntBASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SIMC1Q8NDZ2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIMC1Q8NDZ2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIMC1Q8NDZ2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SIMC1Q8NDZ2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC092104.1-201ENST00000497346 1441 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RNA5SP326-201ENST00000363209 110 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RN7SKP145-201ENST00000363291 303 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RNU4-51P-201ENST00000364206 140 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RNA5SP394-201ENST00000364216 119 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RNU6-224P-201ENST00000384055 107 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 Y_RNA.559-201ENST00000384686 107 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 Y_RNA.578-201ENST00000390903 88 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 OR7E101P-201ENST00000400428 513 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 MIR937-201ENST00000401271 86 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 HMGB1P20-201ENST00000402555 677 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RN7SKP286-201ENST00000410894 299 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC099336.2-201ENST00000422457 254 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 MTCYBP5-201ENST00000423752 1135 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC009965.2-201ENST00000425328 970 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC073069.1-201ENST00000428657 441 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 PPIAP13-201ENST00000434706 478 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms