Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC079610.2-201ENST00000604818 690 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC107952.2-201ENST00000606048 486 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC090527.3-201ENST00000619041 548 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC007342.7-201ENST00000624610 2337 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP160-201ENST00000363804 340 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU1-43P-201ENST00000365052 165 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 MIR137-201ENST00000385223 102 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-1320P-201ENST00000390838 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-1269P-201ENST00000391139 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC119751.3-201ENST00000399720 670 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP125-201ENST00000410481 302 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC004690.1-201ENST00000418216 328 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC013429.2-201ENST00000418798 781 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 BX323845.1-201ENST00000432417 179 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL591623.2-201ENST00000449978 222 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-599P-201ENST00000459383 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-1193P-201ENST00000459461 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC091180.1-201ENST00000462104 372 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RN7SL443P-201ENST00000464331 290 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC009127.1-201ENST00000467090 155 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 UBA52P7-201ENST00000486088 380 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 MTCO3P28-201ENST00000513351 515 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC118465.1-201ENST00000513820 1271 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 BX510359.5-201ENST00000515651 304 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 IGHV3-63-201ENST00000518422 341 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC109635.6-201ENST00000525487 1113 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC135279.1-201ENST00000543493 504 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC021171.1-201ENST00000603137 706 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 Z94722.1-201ENST00000604328 474 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC024060.1-201ENST00000607052 494 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC064807.4-201ENST00000607201 407 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 MIR6837-201ENST00000620884 64 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-368P-201ENST00000620928 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RNU6-538P-201ENST00000622329 107 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC090897.3-201ENST00000636973 1157 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AL049767.1-202ENST00000637826 242 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 CASC19-264ENST00000641912 1184 ntBASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLIP4Q8N3C7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP162-201ENST00000363605 345 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 RNU4-7P-201ENST00000364758 141 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 MIR143-201ENST00000385300 106 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 U3.25-201ENST00000391209 220 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 RPS24P12-201ENST00000402084 394 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 TXNL1P1-201ENST00000429528 554 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 HMGB3P10-201ENST00000434734 572 ntBASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.68□□□□□ -1.66
CLIP4Q8N3C7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms