Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MTCO2P22-201ENST00000603246 681 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC010857.1-201ENST00000606398 594 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC026979.4-201ENST00000606555 645 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 RPL23AP61-201ENST00000623642 466 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC007382.1-201ENST00000624376 2618 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 IL6STP1-201ENST00000346911 1020 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 RNU1-32P-201ENST00000363937 159 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 LRRC37BP1-201ENST00000398851 714 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 GLULP6-201ENST00000399502 913 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 RPS12P5-201ENST00000423449 371 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC009965.2-201ENST00000425328 970 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC092017.2-201ENST00000427600 362 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 C4BPAP2-201ENST00000428434 478 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 NRBF2P3-201ENST00000432731 865 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 RPL36AP15-201ENST00000444514 266 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL691482.1-201ENST00000453255 87 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC010683.1-201ENST00000473673 378 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC021146.3-201ENST00000511911 260 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 ENPP7P9-201ENST00000514456 627 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 RNU2-30P-201ENST00000516209 141 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL512310.9-201ENST00000553311 948 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AGGF1P9-201ENST00000561884 913 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC022884.3-201ENST00000579571 248 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC209154.1-201ENST00000582156 337 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 MIR4697-201ENST00000582977 78 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 MIR4512-201ENST00000583257 77 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 ABI1P1-201ENST00000603375 1120 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC007423.1-201ENST00000605009 627 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL023583.1-201ENST00000607518 1143 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL049794.2-201ENST00000616301 365 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AL731566.2-201ENST00000618971 317 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC012414.7-202ENST00000622705 1090 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC079298.2-201ENST00000623885 459 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 AP003497.2-201ENST00000624220 967 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 AC010928.1-201ENST00000592477 1447 ntBASIC3.1□□□□□ -1.91
SCXQ7RTU7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SCXQ7RTU7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.1□□□□□ -1.91
SCXQ7RTU7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCXQ7RTU7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SCXQ7RTU7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SCXQ7RTU7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.09□□□□□ -1.91
SCXQ7RTU7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCXQ7RTU7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.09□□□□□ -1.91
SCXQ7RTU7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.09□□□□□ -1.91
SCXQ7RTU7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SCXQ7RTU7 SNORA73.1-201ENST00000363107 205 ntBASIC3.09□□□□□ -1.91
SCXQ7RTU7 RNU6-670P-201ENST00000364312 104 ntBASIC3.09□□□□□ -1.91
SCXQ7RTU7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCXQ7RTU7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms