Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RFX4Q33E94 LINC00622-201ENST00000562811 1570 ntBASIC4.14□□□□□ -1.75
RFX4Q33E94 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX4Q33E94 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX4Q33E94 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX4Q33E94 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX4Q33E94 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RFX4Q33E94 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFX4Q33E94 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 RNU6-891P-201ENST00000384280 111 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 SPTLC1P2-201ENST00000407089 121 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RNU2-50P-201ENST00000410494 143 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RBMY1KP-201ENST00000423480 476 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 Z85994.2-201ENST00000434327 452 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AL353597.2-202ENST00000434901 373 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AL357520.1-201ENST00000441557 453 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 CASP3P1-201ENST00000446037 609 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AC026348.1-201ENST00000462549 1053 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RPL23AP2-201ENST00000471227 466 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 RPS26P15-201ENST00000488067 348 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RPS4XP14-201ENST00000493072 781 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RN7SL808P-201ENST00000496066 299 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AC110775.1-201ENST00000513721 462 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.13□□□□□ -1.75
RFX4Q33E94 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.13□□□□□ -1.75
RFX4Q33E94 OR7E18P-201ENST00000592589 702 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 BNIP3P7-201ENST00000605641 516 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 Z98200.1-201ENST00000607298 470 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AL121873.1-201ENST00000616013 524 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 RMST_9.1-201ENST00000619945 193 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 AC019278.1-201ENST00000623516 479 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 BX005019.1-201ENST00000561881 1810 ntBASIC4.13□□□□□ -1.75
RFX4Q33E94 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RFX4Q33E94 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX4Q33E94 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RFX4Q33E94 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX4Q33E94 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 RNA5SP191-201ENST00000362585 102 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 RNU4-23P-201ENST00000362839 140 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 RNU6-984P-201ENST00000363236 109 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX4Q33E94 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFX4Q33E94 AL136131.1-201ENST00000406079 803 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX4Q33E94 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX4Q33E94 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 MTND2P2-201ENST00000434633 945 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 SUMO2P1-206ENST00000445436 284 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 RNU6-775P-201ENST00000459318 96 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 AC104763.1-201ENST00000475274 360 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 HMGB3P14-201ENST00000494195 599 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.12□□□□□ -1.75
RFX4Q33E94 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.12□□□□□ -1.75
RFX4Q33E94 RNA5SP497-201ENST00000516081 97 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 OR5AZ1P-201ENST00000527448 943 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.12□□□□□ -1.75
RFX4Q33E94 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.12□□□□□ -1.75
RFX4Q33E94 EDDM3DP-201ENST00000554692 434 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 AC105129.1-201ENST00000560250 297 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFX4Q33E94 FAM106CP-201ENST00000582212 507 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.12□□□□□ -1.75
RFX4Q33E94 AC026368.1-201ENST00000614934 690 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 AC068870.2-201ENST00000620635 389 ntBASIC4.12□□□□□ -1.75
RFX4Q33E94 BMS1P21-201ENST00000634565 365 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms