Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC123786.2-201ENST00000603459 275 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AL353726.1-201ENST00000614041 1000 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC009229.4-201ENST00000623854 1947 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC017007.4-201ENST00000503353 1352 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RN7SKP149-201ENST00000363008 344 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RNA5SP113-201ENST00000410486 84 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RSU1P3-201ENST00000412878 835 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 TRIM60P17-201ENST00000415181 719 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 BX510359.2-201ENST00000417920 305 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC004074.1-201ENST00000421810 1063 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 VN1R32P-201ENST00000452234 905 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 CLIC4P1-201ENST00000453177 535 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC091685.2-201ENST00000454924 864 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RPL23AP71-201ENST00000470966 469 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RPL36AP41-201ENST00000493820 306 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC020593.1-201ENST00000507399 299 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 OR5AZ1P-201ENST00000527448 943 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AP000676.2-201ENST00000529711 301 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 UBTFL9-201ENST00000534504 1148 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC009101.1-201ENST00000568135 242 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 MIR4646-201ENST00000580775 63 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC103792.1-201ENST00000603591 919 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC016769.4-201ENST00000616893 535 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC090510.2-201ENST00000617465 629 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC233309.1-201ENST00000619522 751 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 MIR6853-201ENST00000619642 74 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC087385.3-201ENST00000620477 187 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC068870.2-201ENST00000620635 389 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 U3.53-201ENST00000628922 216 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 AC018555.1-201ENST00000567548 1980 ntBASIC3.43□□□□□ -1.86
HIST1H1AQ02539 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HIST1H1AQ02539 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 SDAD1P1-202ENST00000524156 2051 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL590240.1-201ENST00000334118 313 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 SNORA74A-201ENST00000364089 198 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 VN1R8P-201ENST00000407739 893 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 BX510359.3-201ENST00000422168 306 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC234779.1-201ENST00000425910 285 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 AC073335.1-201ENST00000427776 363 ntBASIC3.42□□□□□ -1.86
HIST1H1AQ02539 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.42□□□□□ -1.86
HIST1H1AQ02539 PPIAP17-201ENST00000438507 471 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms