Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS1Q01581 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HMGCS1Q01581 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC015813.6-201ENST00000624409 5808 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS1Q01581 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 RNU1-108P-201ENST00000362556 161 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RNU1-94P-201ENST00000362627 173 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC097374.1-203ENST00000400783 485 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RPS3AP23-201ENST00000401762 784 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RPS4XP9-201ENST00000405151 780 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 EIF4A1P3-201ENST00000411521 244 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 GSTM3P2-201ENST00000412746 530 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RPL26P29-201ENST00000415623 438 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC069213.2-201ENST00000420238 366 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 FTH1P16-201ENST00000435241 552 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 GEMIN8P3-201ENST00000445417 720 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC022431.1-201ENST00000450941 438 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RPL21P126-201ENST00000470049 478 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC022795.1-201ENST00000473808 480 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RN7SL205P-201ENST00000490174 284 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 UBA52P3-201ENST00000491303 382 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 RNA5SP228-201ENST00000516232 133 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 HMGB1P19-201ENST00000517578 577 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC134698.5-201ENST00000519444 336 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 AP001160.4-201ENST00000596971 382 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 AC234771.5-201ENST00000600161 514 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 MIR6820-201ENST00000611508 62 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 RN7SL722P-201ENST00000617780 284 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 RN7SL565P-201ENST00000618246 284 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS1Q01581 MAPK10-304ENST00000641341 3984 ntBASIC4.2□□□□□ -1.74
HMGCS1Q01581 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS1Q01581 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HMGCS1Q01581 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC008033.1-201ENST00000216407 1162 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPS23P10-201ENST00000416185 486 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 AL590609.2-201ENST00000421430 368 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC245028.1-201ENST00000423259 256 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPEP3-201ENST00000425462 676 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 PRELID3BP10-201ENST00000431957 584 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC114495.1-201ENST00000441274 436 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPL7P33-201ENST00000444159 742 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 ARL2BPP10-201ENST00000446487 531 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 ABCF2P2-201ENST00000450549 296 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 FCF1P7-201ENST00000451185 558 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 OR6C72P-201ENST00000451403 892 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RPL7P22-201ENST00000466005 733 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC053481.1-201ENST00000467217 306 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 RN7SL738P-201ENST00000470264 297 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 OR52A4P-201ENST00000472867 958 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 RN7SKP92-201ENST00000517266 244 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AP000827.1-201ENST00000527814 258 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 PHBP17-201ENST00000528576 541 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 OR5BC1P-201ENST00000529327 739 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 CR383656.6-201ENST00000550518 394 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AL352979.3-201ENST00000553515 247 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS1Q01581 MIR4330-201ENST00000579077 105 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 FAM106CP-201ENST00000582212 507 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC008782.1-201ENST00000603386 430 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC015908.5-201ENST00000623289 343 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 AC019278.1-201ENST00000623516 479 ntBASIC4.19□□□□□ -1.74
HMGCS1Q01581 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms