Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH4P55283 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH4P55283 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH4P55283 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH4P55283 C1GALT1P3-201ENST00000522049 819 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC009643.1-201ENST00000532030 391 ntBASIC4.59□□□□□ -1.67
CDH4P55283 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH4P55283 PDCD5P1-201ENST00000543528 309 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC068831.4-201ENST00000556118 109 ntBASIC4.59□□□□□ -1.67
CDH4P55283 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH4P55283 MIR4284-201ENST00000578924 81 ntBASIC4.59□□□□□ -1.67
CDH4P55283 NXPH1-205ENST00000602349 1953 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC090181.2-201ENST00000602975 672 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC005229.3-201ENST00000603438 323 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC034236.3-201ENST00000605999 461 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC090948.1-201ENST00000607464 549 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC022106.2-201ENST00000620114 757 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC087565.3-202ENST00000642085 1603 ntBASIC4.59□□□□□ -1.67
CDH4P55283 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDH4P55283 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.59□□□□□ -1.68
CDH4P55283 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CDH4P55283 AC025031.4-201ENST00000621248 3271 ntBASIC4.59□□□□□ -1.68
CDH4P55283 AC010300.1-201ENST00000600671 5134 ntBASIC4.59□□□□□ -1.68
CDH4P55283 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH4P55283 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH4P55283 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH4P55283 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH4P55283 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH4P55283 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH4P55283 IGKV7-3-201ENST00000357453 298 ntBASIC4.58□□□□□ -1.68
CDH4P55283 RNU1-130P-201ENST00000363930 160 ntBASIC4.58□□□□□ -1.68
CDH4P55283 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH4P55283 RNU1-63P-201ENST00000383902 164 ntBASIC4.58□□□□□ -1.68
CDH4P55283 RPS24P12-201ENST00000402084 394 ntBASIC4.58□□□□□ -1.68
CDH4P55283 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH4P55283 VDAC1P9-201ENST00000412766 841 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 RPL12P34-201ENST00000424532 479 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC011998.1-201ENST00000433403 117 ntBASIC4.58□□□□□ -1.68
CDH4P55283 FTH1P16-201ENST00000435241 552 ntBASIC4.58□□□□□ -1.68
CDH4P55283 CACYBPP1-201ENST00000438592 684 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 AC099063.2-201ENST00000446360 662 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH4P55283 CALM1P2-201ENST00000452941 448 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH4P55283 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 RPS27AP17-201ENST00000463344 455 ntBASIC4.58□□□□□ -1.68
CDH4P55283 STRADBP1-201ENST00000478954 1281 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH4P55283 BTG4P1-201ENST00000510421 183 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH4P55283 IGLVIV-65-201ENST00000517313 360 ntBASIC4.58□□□□□ -1.68
CDH4P55283 IGHV3-63-201ENST00000518422 341 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC034205.1-201ENST00000520621 638 ntBASIC4.58□□□□□ -1.68
CDH4P55283 NPM1P35-201ENST00000533043 868 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH4P55283 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH4P55283 MIR4277-201ENST00000578298 84 ntBASIC4.58□□□□□ -1.68
CDH4P55283 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH4P55283 AF230666.2-201ENST00000602328 725 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC084373.1-201ENST00000603311 235 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC103792.1-201ENST00000603591 919 ntBASIC4.58□□□□□ -1.68
CDH4P55283 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH4P55283 MIR6891-201ENST00000618788 93 ntBASIC4.58□□□□□ -1.68
CDH4P55283 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH4P55283 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH4P55283 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH4P55283 AC005332.5-201ENST00000591222 2919 ntBASIC4.57□□□□□ -1.68
CDH4P55283 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH4P55283 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH4P55283 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH4P55283 RNU4-39P-201ENST00000362455 127 ntBASIC4.57□□□□□ -1.68
CDH4P55283 RNA5SP151-201ENST00000365632 117 ntBASIC4.57□□□□□ -1.68
CDH4P55283 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDH4P55283 MIR3065-201ENST00000390137 79 ntBASIC4.57□□□□□ -1.68
CDH4P55283 U3.22-201ENST00000391120 215 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AC016397.1-201ENST00000412463 242 ntBASIC4.57□□□□□ -1.68
CDH4P55283 RPL18P10-201ENST00000425606 538 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AL732292.1-201ENST00000426692 226 ntBASIC4.57□□□□□ -1.68
CDH4P55283 PPIAP13-201ENST00000434706 478 ntBASIC4.57□□□□□ -1.68
CDH4P55283 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH4P55283 AC009220.1-201ENST00000451614 275 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH4P55283 VN1R32P-201ENST00000452234 905 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AC021205.1-201ENST00000468797 348 ntBASIC4.57□□□□□ -1.68
CDH4P55283 RPL23AP65-201ENST00000475608 468 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AC108022.1-201ENST00000493466 478 ntBASIC4.57□□□□□ -1.68
CDH4P55283 ARL4AP1-201ENST00000503220 705 ntBASIC4.57□□□□□ -1.68
CDH4P55283 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH4P55283 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH4P55283 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH4P55283 AC008676.3-201ENST00000521237 435 ntBASIC4.57□□□□□ -1.68
CDH4P55283 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH4P55283 GSTP1P1-201ENST00000548078 319 ntBASIC4.57□□□□□ -1.68
CDH4P55283 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms