Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC103987.1-201ENST00000473394 348 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AC068587.1-201ENST00000483613 781 ntBASIC4.67□□□□□ -1.66
PDX1P52945 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.67□□□□□ -1.66
PDX1P52945 IGBP1P5-201ENST00000507524 1000 ntBASIC4.67□□□□□ -1.66
PDX1P52945 CIR1P1-201ENST00000524055 1133 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.67□□□□□ -1.66
PDX1P52945 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.67□□□□□ -1.66
PDX1P52945 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 AGGF1P9-201ENST00000561884 913 ntBASIC4.67□□□□□ -1.66
PDX1P52945 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.67□□□□□ -1.66
PDX1P52945 OR1AB1P-201ENST00000585564 761 ntBASIC4.67□□□□□ -1.66
PDX1P52945 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 SUMO2P14-201ENST00000604488 293 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL445423.1-201ENST00000609941 536 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 AC016957.2-201ENST00000616998 848 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AC022306.3-201ENST00000619930 550 ntBASIC4.67□□□□□ -1.66
PDX1P52945 AL359757.1-201ENST00000623176 255 ntBASIC4.67□□□□□ -1.66
PDX1P52945 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDX1P52945 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 AC007382.1-201ENST00000624376 2618 ntBASIC4.67□□□□□ -1.66
PDX1P52945 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDX1P52945 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.67□□□□□ -1.66
PDX1P52945 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 MTND5P11-201ENST00000511037 1812 ntBASIC4.67□□□□□ -1.66
PDX1P52945 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PDX1P52945 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDX1P52945 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.67□□□□□ -1.66
PDX1P52945 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDX1P52945 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 RNU6-481P-201ENST00000384194 107 ntBASIC4.66□□□□□ -1.66
PDX1P52945 MIR129-1-201ENST00000384972 72 ntBASIC4.66□□□□□ -1.66
PDX1P52945 MIR620-201ENST00000385232 95 ntBASIC4.66□□□□□ -1.66
PDX1P52945 U3.22-201ENST00000391120 215 ntBASIC4.66□□□□□ -1.66
PDX1P52945 RPL22P22-201ENST00000395439 379 ntBASIC4.66□□□□□ -1.66
PDX1P52945 RNA5SP345-201ENST00000410646 108 ntBASIC4.66□□□□□ -1.66
PDX1P52945 RNU2-22P-201ENST00000411266 212 ntBASIC4.66□□□□□ -1.66
PDX1P52945 ELOCP19-201ENST00000411919 318 ntBASIC4.66□□□□□ -1.66
PDX1P52945 CHIAP3-201ENST00000423668 1133 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AC069540.1-201ENST00000446320 988 ntBASIC4.66□□□□□ -1.66
PDX1P52945 CLIC4P1-201ENST00000453177 535 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AL356981.1-201ENST00000454879 684 ntBASIC4.66□□□□□ -1.66
PDX1P52945 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.66□□□□□ -1.66
PDX1P52945 RPS20P4-201ENST00000461659 355 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 AC023424.1-201ENST00000496058 459 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC112518.2-201ENST00000508565 425 ntBASIC4.66□□□□□ -1.66
PDX1P52945 RNU2-30P-201ENST00000516209 141 ntBASIC4.66□□□□□ -1.66
PDX1P52945 SNORA31.13-201ENST00000516624 135 ntBASIC4.66□□□□□ -1.66
PDX1P52945 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.66□□□□□ -1.66
PDX1P52945 AP003355.1-201ENST00000518956 587 ntBASIC4.66□□□□□ -1.66
PDX1P52945 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AL110118.1-201ENST00000553543 400 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 AC116553.2-201ENST00000564203 463 ntBASIC4.66□□□□□ -1.66
PDX1P52945 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 AC010424.2-201ENST00000607594 443 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC112503.2-201ENST00000609005 552 ntBASIC4.66□□□□□ -1.66
PDX1P52945 FAM27B-201ENST00000610601 213 ntBASIC4.66□□□□□ -1.66
PDX1P52945 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
PDX1P52945 BNIP3P41-202ENST00000616656 861 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AL022401.1-201ENST00000619498 108 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC019206.1-201ENST00000621938 425 ntBASIC4.66□□□□□ -1.66
PDX1P52945 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
PDX1P52945 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.66□□□□□ -1.66
PDX1P52945 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDX1P52945 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.66□□□□□ -1.66
PDX1P52945 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms