Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC009238.2-201ENST00000431026 355 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 YWHAEP5-201ENST00000431545 765 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 TDGF1P1-201ENST00000445734 527 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC002553.2-201ENST00000453217 340 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC079203.1-201ENST00000487972 404 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC010460.2-201ENST00000509054 677 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC010285.3-201ENST00000511668 676 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC119751.1-201ENST00000513357 765 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 HMGN1P9-201ENST00000515212 298 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.71□□□□□ -1.5
TM4SF4P48230 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC027667.1-201ENST00000545814 304 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC009948.4-201ENST00000604692 675 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 U1.25-201ENST00000614085 162 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.71□□□□□ -1.5
TM4SF4P48230 BX005019.1-201ENST00000561881 1810 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC019072.1-201ENST00000604535 1551 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 AL122126.1-201ENST00000546905 1318 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM4SF4P48230 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
TM4SF4P48230 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 MTCO1P6-201ENST00000481192 1384 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC092638.1-201ENST00000411966 1275 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 Z80107.1-201ENST00000436830 412 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AL050341.1-201ENST00000447743 313 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 EXOSC3P1-201ENST00000448649 500 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 AL935212.3-201ENST00000450729 284 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 TPMTP4-201ENST00000450749 678 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 PRELID3BP4-201ENST00000515476 571 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 OR8A2P-201ENST00000528631 952 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 NDUFS5P6-201ENST00000529136 295 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 AC034105.4-201ENST00000568304 277 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.7□□□□□ -1.5
TM4SF4P48230 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 RPP40P2-201ENST00000603596 712 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 CYCSP41-201ENST00000616920 296 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC017104.5-201ENST00000637647 639 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 LINC01808-202ENST00000641680 1116 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC239868.2-201ENST00000564237 4527 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
TM4SF4P48230 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TM4SF4P48230 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.7□□□□□ -1.5
TM4SF4P48230 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 NSRP1P1-201ENST00000444067 1693 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 AC046144.1-201ENST00000478559 1853 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 ANKRD36P1-201ENST00000344424 659 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TM4SF4P48230 RNA5SP509-201ENST00000364577 119 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TM4SF4P48230 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM4SF4P48230 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TM4SF4P48230 RNU6-549P-201ENST00000384433 107 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 U3.23-201ENST00000391132 200 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 U3.28-201ENST00000391249 210 ntBASIC5.69□□□□□ -1.5
TM4SF4P48230 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms