Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP265-201ENST00000516448 223 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 RN7SKP283-201ENST00000517197 270 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 NRBF2P4-201ENST00000520874 850 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC027455.1-201ENST00000574104 594 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AL160237.3-201ENST00000604114 1013 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC018926.3-201ENST00000618841 406 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC139713.2-210ENST00000641741 992 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 RN7SKP224-201ENST00000364140 325 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AL133388.1-201ENST00000404509 287 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 RNU6-77P-201ENST00000410554 91 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 RPL7P4-203ENST00000430239 730 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-1P43699 TPTE2P3-201ENST00000441562 1189 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 EEF1A1P1-201ENST00000447052 739 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 RPL7L1P1-201ENST00000448259 785 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 NDUFA5P5-201ENST00000468361 342 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-1P43699 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC109481.1-201ENST00000509173 282 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC008494.2-201ENST00000514544 370 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-1P43699 NDUFA5P11-201ENST00000567995 343 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.16□□□□□ -1.74
NKX2-1P43699 CYCSP40-201ENST00000575927 294 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC110743.1-201ENST00000584870 478 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 MTCO2P2-201ENST00000591258 225 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 BNIP3P32-201ENST00000600015 554 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 RNF138P2-201ENST00000603490 592 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC098935.2-201ENST00000604222 466 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC073387.2-201ENST00000604797 784 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC234782.5-201ENST00000617723 324 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.16□□□□□ -1.74
NKX2-1P43699 AC132068.1-201ENST00000623805 459 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.16□□□□□ -1.74
NKX2-1P43699 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NKX2-1P43699 SALL4P2-201ENST00000423288 2910 ntBASIC4.16□□□□□ -1.74
NKX2-1P43699 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NKX2-1P43699 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
NKX2-1P43699 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms