Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.41□□□□□ -1.7
RORAP35398 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RORAP35398 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 FABP12P1-201ENST00000401911 322 ntBASIC4.41□□□□□ -1.7
RORAP35398 AP000580.1-201ENST00000404439 358 ntBASIC4.41□□□□□ -1.7
RORAP35398 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 OR2X1P-201ENST00000421144 687 ntBASIC4.41□□□□□ -1.7
RORAP35398 OR6K4P-201ENST00000423179 955 ntBASIC4.41□□□□□ -1.7
RORAP35398 RPL12P28-201ENST00000430852 489 ntBASIC4.41□□□□□ -1.7
RORAP35398 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AC091390.1-201ENST00000433904 331 ntBASIC4.41□□□□□ -1.7
RORAP35398 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 TPT1P12-201ENST00000448968 492 ntBASIC4.41□□□□□ -1.7
RORAP35398 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 IFNWP4-201ENST00000453148 294 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.41□□□□□ -1.7
RORAP35398 AC090142.1-201ENST00000465776 462 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC020890.1-201ENST00000491837 504 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC007016.1-201ENST00000512110 244 ntBASIC4.41□□□□□ -1.7
RORAP35398 MTCYBP19-201ENST00000517463 1124 ntBASIC4.41□□□□□ -1.7
RORAP35398 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
RORAP35398 NPM1P35-201ENST00000533043 868 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AC084783.1-201ENST00000565846 910 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC069061.3-201ENST00000582254 823 ntBASIC4.41□□□□□ -1.7
RORAP35398 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AC008782.1-201ENST00000603386 430 ntBASIC4.41□□□□□ -1.7
RORAP35398 AL133338.2-201ENST00000604292 736 ntBASIC4.41□□□□□ -1.7
RORAP35398 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.41□□□□□ -1.7
RORAP35398 AL356218.2-201ENST00000605264 187 ntBASIC4.41□□□□□ -1.7
RORAP35398 AC015922.4-201ENST00000612568 690 ntBASIC4.41□□□□□ -1.7
RORAP35398 MIR6758-201ENST00000620653 63 ntBASIC4.41□□□□□ -1.7
RORAP35398 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.41□□□□□ -1.7
RORAP35398 AL049536.1-201ENST00000625043 744 ntBASIC4.41□□□□□ -1.7
RORAP35398 U3.53-201ENST00000628922 216 ntBASIC4.41□□□□□ -1.7
RORAP35398 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 AC139713.2-214ENST00000642059 1811 ntBASIC4.41□□□□□ -1.7
RORAP35398 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 AL031119.1-201ENST00000404707 1879 ntBASIC4.41□□□□□ -1.7
RORAP35398 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RORAP35398 AL445437.1-201ENST00000623157 3087 ntBASIC4.4□□□□□ -1.7
RORAP35398 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RORAP35398 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.4□□□□□ -1.7
RORAP35398 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.4□□□□□ -1.7
RORAP35398 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RORAP35398 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RORAP35398 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RORAP35398 RNU4-39P-201ENST00000362455 127 ntBASIC4.4□□□□□ -1.71
RORAP35398 SNORA71.2-201ENST00000364941 134 ntBASIC4.4□□□□□ -1.71
RORAP35398 U3.22-201ENST00000391120 215 ntBASIC4.4□□□□□ -1.71
RORAP35398 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RORAP35398 HSPD1P16-201ENST00000402302 394 ntBASIC4.4□□□□□ -1.71
RORAP35398 P2RY10P2-201ENST00000416730 913 ntBASIC4.4□□□□□ -1.71
RORAP35398 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RORAP35398 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
RORAP35398 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.4□□□□□ -1.71
RORAP35398 EIF2S2P2-201ENST00000447161 982 ntBASIC4.4□□□□□ -1.71
RORAP35398 RHEBP2-201ENST00000450289 600 ntBASIC4.4□□□□□ -1.71
RORAP35398 FCF1P7-201ENST00000451185 558 ntBASIC4.4□□□□□ -1.71
RORAP35398 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
RORAP35398 RPS23P7-201ENST00000466210 444 ntBASIC4.4□□□□□ -1.71
RORAP35398 RN7SL385P-201ENST00000468873 276 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC105918.1-201ENST00000474399 838 ntBASIC4.4□□□□□ -1.71
RORAP35398 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RORAP35398 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
RORAP35398 VTA1P2-201ENST00000520205 911 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC008676.3-201ENST00000521237 435 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.71
RORAP35398 GLRXP2-201ENST00000555594 321 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.4□□□□□ -1.71
RORAP35398 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 MIR4277-201ENST00000578298 84 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.4□□□□□ -1.71
RORAP35398 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.4□□□□□ -1.71
RORAP35398 AC009303.3-201ENST00000591103 736 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC005191.1-201ENST00000603950 358 ntBASIC4.4□□□□□ -1.71
RORAP35398 AC017076.1-201ENST00000607613 578 ntBASIC4.4□□□□□ -1.71
RORAP35398 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RORAP35398 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RORAP35398 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms