Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL158062.1-201ENST00000619632 745 ntBASIC5.51□□□□□ -1.53
RFC4P35249 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RFC4P35249 AC100778.3-201ENST00000580060 1750 ntBASIC5.51□□□□□ -1.53
RFC4P35249 AL133243.3-201ENST00000617415 3004 ntBASIC5.51□□□□□ -1.53
RFC4P35249 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.51□□□□□ -1.53
RFC4P35249 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RFC4P35249 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RFC4P35249 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RFC4P35249 OR51H2P-202ENST00000641424 3046 ntBASIC5.5□□□□□ -1.53
RFC4P35249 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 SNORA71.3-201ENST00000362582 128 ntBASIC5.5□□□□□ -1.53
RFC4P35249 RNA5SP387-201ENST00000364226 106 ntBASIC5.5□□□□□ -1.53
RFC4P35249 RNA5SP175-201ENST00000364275 119 ntBASIC5.5□□□□□ -1.53
RFC4P35249 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 RNA5SP372-201ENST00000390836 115 ntBASIC5.5□□□□□ -1.53
RFC4P35249 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.5□□□□□ -1.53
RFC4P35249 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 OR8F1P-201ENST00000425243 930 ntBASIC5.5□□□□□ -1.53
RFC4P35249 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC4P35249 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC4P35249 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.5□□□□□ -1.53
RFC4P35249 RHEBP2-201ENST00000450289 600 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AC002553.2-201ENST00000453217 340 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.5□□□□□ -1.53
RFC4P35249 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC4P35249 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC4P35249 AC091564.1-201ENST00000464563 479 ntBASIC5.5□□□□□ -1.53
RFC4P35249 RPL7L1P8-201ENST00000469911 741 ntBASIC5.5□□□□□ -1.53
RFC4P35249 OR9N1P-201ENST00000491296 333 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AGGF1P3-201ENST00000493675 1213 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC4P35249 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.5□□□□□ -1.53
RFC4P35249 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC4P35249 AL451086.1-201ENST00000605596 223 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AL021997.2-201ENST00000615674 271 ntBASIC5.5□□□□□ -1.53
RFC4P35249 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC4P35249 AL445363.3-201ENST00000623080 671 ntBASIC5.5□□□□□ -1.53
RFC4P35249 AC010608.2-201ENST00000624830 470 ntBASIC5.5□□□□□ -1.53
RFC4P35249 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC4P35249 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC4P35249 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC4P35249 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 AC093775.1-201ENST00000624154 1868 ntBASIC5.49□□□□□ -1.53
RFC4P35249 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.49□□□□□ -1.53
RFC4P35249 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.49□□□□□ -1.53
RFC4P35249 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFC4P35249 MIR200C-201ENST00000384980 68 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-1320P-201ENST00000390838 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-1269P-201ENST00000391139 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RPL17P50-201ENST00000396131 546 ntBASIC5.49□□□□□ -1.53
RFC4P35249 SNORA81-201ENST00000408493 178 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RN7SKP182-201ENST00000410772 298 ntBASIC5.49□□□□□ -1.53
RFC4P35249 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC4P35249 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-599P-201ENST00000459383 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-1193P-201ENST00000459461 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 DEFB109A-201ENST00000482450 265 ntBASIC5.49□□□□□ -1.53
RFC4P35249 AC016687.1-201ENST00000482574 353 ntBASIC5.49□□□□□ -1.53
RFC4P35249 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 AL592156.1-201ENST00000508758 304 ntBASIC5.49□□□□□ -1.53
RFC4P35249 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 RN7SKP34-201ENST00000516142 244 ntBASIC5.49□□□□□ -1.53
RFC4P35249 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC4P35249 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 AC015912.2-201ENST00000571053 181 ntBASIC5.49□□□□□ -1.53
RFC4P35249 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC4P35249 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-368P-201ENST00000620928 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 RNU6-538P-201ENST00000622329 107 ntBASIC5.49□□□□□ -1.53
RFC4P35249 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms