Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CASQ1P31415 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CASQ1P31415 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
CASQ1P31415 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 FAM35DP-201ENST00000323387 2712 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 RNA5SP388-201ENST00000362584 119 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 Z98745.1-201ENST00000402553 494 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 OR2B7P-201ENST00000429302 934 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC108463.1-201ENST00000450258 347 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AC005229.2-201ENST00000456995 399 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC018635.1-201ENST00000468292 1030 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 SEPT7P6-201ENST00000469999 1143 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CASQ1P31415 MIR2114-201ENST00000516645 80 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.79□□□□□ -1.64
CASQ1P31415 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.79□□□□□ -1.64
CASQ1P31415 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.79□□□□□ -1.64
CASQ1P31415 RPL23AP97-201ENST00000568955 471 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AC015911.5-201ENST00000587076 451 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 BPIFA4P-203ENST00000603168 689 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 AC100847.1-201ENST00000611316 481 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 C2orf27A-204ENST00000623058 969 ntBASIC4.79□□□□□ -1.64
CASQ1P31415 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.79□□□□□ -1.64
CASQ1P31415 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.79□□□□□ -1.64
CASQ1P31415 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASQ1P31415 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASQ1P31415 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.78□□□□□ -1.64
CASQ1P31415 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.78□□□□□ -1.64
CASQ1P31415 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
CASQ1P31415 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASQ1P31415 AMD1P2-201ENST00000412936 992 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.78□□□□□ -1.64
CASQ1P31415 RAD23BP1-201ENST00000421404 1227 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 HMGB1P16-201ENST00000447155 540 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 FAR2P1-206ENST00000449736 709 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AURKAPS2-201ENST00000454983 333 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AC090114.3-201ENST00000479267 829 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AC004980.4-201ENST00000513375 203 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AC022790.1-201ENST00000522872 204 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.78□□□□□ -1.64
CASQ1P31415 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 AL360157.1-201ENST00000565962 87 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 SNORD95-201ENST00000579879 68 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.78□□□□□ -1.64
CASQ1P31415 MIR432-201ENST00000606207 94 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 AC004477.3-201ENST00000614061 590 ntBASIC4.78□□□□□ -1.64
CASQ1P31415 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.78□□□□□ -1.64
CASQ1P31415 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.78□□□□□ -1.64
CASQ1P31415 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CASQ1P31415 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CASQ1P31415 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.77□□□□□ -1.65
CASQ1P31415 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.77□□□□□ -1.65
CASQ1P31415 RNU6-673P-201ENST00000365084 104 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.77□□□□□ -1.65
CASQ1P31415 AL031985.1-201ENST00000392713 418 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 SNORA74C-2-201ENST00000411179 201 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 JKAMPP1-201ENST00000413804 919 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AL513325.1-201ENST00000417716 1034 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.77□□□□□ -1.65
CASQ1P31415 RPS12P23-201ENST00000419579 400 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AC093698.1-201ENST00000423843 571 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 RPL30P3-201ENST00000424262 333 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AC234779.1-201ENST00000425910 285 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.77□□□□□ -1.65
CASQ1P31415 AL353093.1-201ENST00000441292 436 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AL606490.1-201ENST00000452266 765 ntBASIC4.77□□□□□ -1.65
CASQ1P31415 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.77□□□□□ -1.65
CASQ1P31415 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms