Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC087272.1-201ENST00000523624 533 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC13P31276 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC13P31276 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 AC040174.2-201ENST00000602701 465 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AL590392.1-201ENST00000604960 446 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 AC092953.2-201ENST00000608000 699 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC055764.2-201ENST00000610089 670 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AL049794.2-201ENST00000616301 365 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC015726.3-201ENST00000624501 418 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 AC016717.3-201ENST00000624730 554 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 CR392039.4-201ENST00000624968 501 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXC13P31276 MAPK10-263ENST00000641052 4307 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
HOXC13P31276 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
HOXC13P31276 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC13P31276 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HOXC13P31276 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC13P31276 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC13P31276 RNF6P1-201ENST00000444889 1784 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC100778.3-201ENST00000580060 1750 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC13P31276 MTND4P21-201ENST00000453886 1357 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC13P31276 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXC13P31276 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC13P31276 QRSL1P2-201ENST00000418582 964 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 RWDD4P2-201ENST00000426392 563 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC13P31276 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.09□□□□□ -1.59
HOXC13P31276 AC089999.1-201ENST00000460336 374 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AL049829.1-201ENST00000465411 156 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 RPS23P7-201ENST00000466210 444 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC093663.2-201ENST00000484625 313 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 RWDD4P1-201ENST00000488019 565 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 GAPDHP56-201ENST00000506031 988 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 ENPP7P9-201ENST00000514456 627 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC13P31276 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC13P31276 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC13P31276 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.09□□□□□ -1.59
HOXC13P31276 OR5M2P-201ENST00000529003 936 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC13P31276 LSM3P2-201ENST00000551246 273 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HOXC13P31276 AC074050.1-201ENST00000563247 211 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC009712.1-201ENST00000564938 316 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC13P31276 MIR5096-201ENST00000583713 70 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC13P31276 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXC13P31276 AL391358.1-201ENST00000605342 190 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AL023881.1-201ENST00000621088 301 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC091948.2-201ENST00000636510 279 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 OR2L1P-202ENST00000641567 1023 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC13P31276 AL139811.1-201ENST00000424779 2299 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC13P31276 SDAD1P1-202ENST00000524156 2051 ntBASIC5.09□□□□□ -1.59
HOXC13P31276 AC139713.2-214ENST00000642059 1811 ntBASIC5.09□□□□□ -1.6
HOXC13P31276 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC092162.3-201ENST00000624511 1624 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 AC017079.1-201ENST00000333650 415 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HOXC13P31276 RNU6-452P-201ENST00000384406 107 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 AL356057.1-202ENST00000402263 756 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 RPS4XP9-201ENST00000405151 780 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 RNA5SP345-201ENST00000410646 108 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 GTF2IP5-201ENST00000414608 731 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 AC013429.2-201ENST00000418798 781 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 MTND4P24-201ENST00000424002 397 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 CENPIP1-201ENST00000425713 902 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC13P31276 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXC13P31276 MTCO1P52-201ENST00000433928 531 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 MED6P1-201ENST00000439659 713 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC111193.1-201ENST00000504097 155 ntBASIC5.08□□□□□ -1.6
HOXC13P31276 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC13P31276 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXC13P31276 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXC13P31276 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms