Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 IGHV1-14-201ENST00000523391 241 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 AL021918.2-201ENST00000613415 194 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ERCC3P19447 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 MTND4P4-201ENST00000439033 1366 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 MTND5P24-201ENST00000438892 1767 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ERCC3P19447 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ERCC3P19447 MIR375-201ENST00000362103 64 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 RNU1-85P-201ENST00000364127 164 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 RNA5SP88-201ENST00000365560 109 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 RNU6-444P-201ENST00000383988 108 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AP003170.5-201ENST00000397185 335 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 RPL23AP39-201ENST00000415533 405 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC093155.2-201ENST00000420734 937 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC3P19447 CENPIP1-201ENST00000425713 902 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC109486.1-201ENST00000486833 374 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 ATP5LP3-201ENST00000514223 304 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 RPS27AP18-201ENST00000515536 459 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 SNORA70.20-201ENST00000516848 126 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC022880.1-201ENST00000534017 973 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC090502.2-201ENST00000549267 280 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC022404.1-201ENST00000555320 273 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC3P19447 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 MIR4489-201ENST00000578869 62 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC008507.1-201ENST00000587506 734 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC3P19447 AC119501.1-201ENST00000603646 475 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC012360.2-201ENST00000609349 391 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 MIR7844-201ENST00000616161 122 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ERCC3P19447 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ERCC3P19447 DOCK11P1-201ENST00000553480 5932 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ERCC3P19447 MTND4P26-201ENST00000415971 1359 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 AC005725.1-201ENST00000577346 2607 ntBASIC6.92□□□□□ -1.3
ERCC3P19447 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC3P19447 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.92□□□□□ -1.3
ERCC3P19447 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 CR383658.2-201ENST00000547576 1525 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 LINC02019-201ENST00000608605 2060 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC3P19447 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
ERCC3P19447 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 AC090017.1-201ENST00000548612 1779 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
ERCC3P19447 RN7SKP128-201ENST00000364270 303 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 RNA5SP500-201ENST00000364486 119 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
ERCC3P19447 SNRPEP2-201ENST00000397592 279 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC016769.2-201ENST00000414815 475 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 RBMY2KP-201ENST00000418221 992 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 BMS1P19-201ENST00000433925 393 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms