Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL1P09341 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 VDAC1P6-201ENST00000430062 855 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 LYPLA1P1-201ENST00000434514 622 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 RPS20P1-201ENST00000434853 354 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL1P09341 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 MTND6P32-201ENST00000457611 483 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 RN7SL727P-201ENST00000482164 296 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 RPL37AP8-201ENST00000494116 276 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL1P09341 RPL31P61-201ENST00000496160 376 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 HPRT1P2-201ENST00000505250 544 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL1P09341 AC090568.1-201ENST00000509499 856 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.32□□□□□ -1.88
CXCL1P09341 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL1P09341 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL1P09341 AL110118.1-201ENST00000553543 400 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL1P09341 AGGF1P8-201ENST00000562979 1000 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 AC087763.1-201ENST00000603391 286 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AC004808.2-201ENST00000627965 773 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 AL049767.1-202ENST00000637826 242 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 AC090017.1-201ENST00000548612 1779 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL1P09341 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 MAPK10-373ENST00000641983 6772 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 AC022893.2-201ENST00000564832 3296 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 ZNF137P-201ENST00000456718 1920 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 SNORA71.2-201ENST00000364941 134 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 OR13C3-201ENST00000374781 1108 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 AL607077.1-201ENST00000401718 499 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 RPL24P2-201ENST00000421023 475 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 RBMY1KP-201ENST00000423480 476 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC112498.1-201ENST00000444401 332 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 EXTL2P1-201ENST00000446218 416 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AC110749.1-201ENST00000462007 357 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC104763.1-201ENST00000475274 360 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL1P09341 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC021146.1-201ENST00000511202 716 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 RN7SKP147-201ENST00000517154 244 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 VTA1P2-201ENST00000520205 911 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AC090819.1-201ENST00000523800 1111 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC244505.7-201ENST00000599675 272 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC128687.2-201ENST00000609657 566 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 uc_338.32-201ENST00000615087 172 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AC022960.2-201ENST00000616300 666 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL1P09341 U3.53-201ENST00000628922 216 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 MIR6715B-201ENST00000637172 77 ntBASIC3.31□□□□□ -1.88
CXCL1P09341 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CXCL1P09341 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CXCL1P09341 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CXCL1P09341 AC092079.1-201ENST00000558620 1985 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms