Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 RNA5SP507-201ENST00000363603 121 ntBASIC3.8□□□□□ -1.8
CD74P04233 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 RN7SKP273-201ENST00000411392 314 ntBASIC3.8□□□□□ -1.8
CD74P04233 AL450992.3-201ENST00000413192 568 ntBASIC3.8□□□□□ -1.8
CD74P04233 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 GJA6P-201ENST00000415117 1042 ntBASIC3.8□□□□□ -1.8
CD74P04233 RPL23AP27-201ENST00000415161 451 ntBASIC3.8□□□□□ -1.8
CD74P04233 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.8□□□□□ -1.8
CD74P04233 FAR2P1-206ENST00000449736 709 ntBASIC3.8□□□□□ -1.8
CD74P04233 FCF1P7-201ENST00000451185 558 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC004815.1-201ENST00000484185 331 ntBASIC3.8□□□□□ -1.8
CD74P04233 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC231760.1-201ENST00000498002 260 ntBASIC3.8□□□□□ -1.8
CD74P04233 PRELID3BP7-201ENST00000503606 469 ntBASIC3.8□□□□□ -1.8
CD74P04233 SCARNA22-201ENST00000503991 125 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.8□□□□□ -1.8
CD74P04233 PHBP17-201ENST00000528576 541 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC022832.1-201ENST00000530718 645 ntBASIC3.8□□□□□ -1.8
CD74P04233 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 AC092490.3-201ENST00000545370 572 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC009303.3-201ENST00000591103 736 ntBASIC3.8□□□□□ -1.8
CD74P04233 AL139286.1-201ENST00000604465 483 ntBASIC3.8□□□□□ -1.8
CD74P04233 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.8□□□□□ -1.8
CD74P04233 GMCL1P2-201ENST00000605230 823 ntBASIC3.8□□□□□ -1.8
CD74P04233 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.8□□□□□ -1.8
CD74P04233 AC015922.4-201ENST00000612568 690 ntBASIC3.8□□□□□ -1.8
CD74P04233 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.8□□□□□ -1.8
CD74P04233 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.8□□□□□ -1.8
CD74P04233 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CD74P04233 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CD74P04233 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.8□□□□□ -1.8
CD74P04233 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CD74P04233 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD74P04233 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
CD74P04233 AC053481.2-202ENST00000582394 1500 ntBASIC3.8□□□□□ -1.8
CD74P04233 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CD74P04233 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 AL118496.1-201ENST00000440201 1812 ntBASIC3.79□□□□□ -1.8
CD74P04233 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
CD74P04233 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 AL645927.1-201ENST00000396783 406 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
CD74P04233 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.79□□□□□ -1.8
CD74P04233 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 ABCF2P2-201ENST00000450549 296 ntBASIC3.79□□□□□ -1.8
CD74P04233 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 AC090114.3-201ENST00000479267 829 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC072052.1-201ENST00000496556 306 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC091917.2-201ENST00000505002 744 ntBASIC3.79□□□□□ -1.8
CD74P04233 SNORD116-26-201ENST00000516006 96 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.79□□□□□ -1.8
CD74P04233 SMARCE1P4-201ENST00000523647 241 ntBASIC3.79□□□□□ -1.8
CD74P04233 MORF4L1P3-201ENST00000525966 950 ntBASIC3.79□□□□□ -1.8
CD74P04233 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 HMGN2P6-201ENST00000551091 273 ntBASIC3.79□□□□□ -1.8
CD74P04233 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.79□□□□□ -1.8
CD74P04233 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 OR11J2P-201ENST00000555298 907 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC068714.1-201ENST00000559623 800 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC007423.1-201ENST00000605009 627 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC007620.3-201ENST00000608131 497 ntBASIC3.79□□□□□ -1.8
CD74P04233 OR6R2P-201ENST00000609216 300 ntBASIC3.79□□□□□ -1.8
CD74P04233 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.79□□□□□ -1.8
CD74P04233 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 AC068870.2-201ENST00000620635 389 ntBASIC3.79□□□□□ -1.8
CD74P04233 AC105105.5-201ENST00000622635 1294 ntBASIC3.79□□□□□ -1.8
CD74P04233 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 LINC00622-201ENST00000562811 1570 ntBASIC3.79□□□□□ -1.8
CD74P04233 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD74P04233 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.79□□□□□ -1.8
CD74P04233 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CD74P04233 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 AL356489.2-201ENST00000566968 3528 ntBASIC3.78□□□□□ -1.8
CD74P04233 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CD74P04233 AC010132.2-201ENST00000295493 1043 ntBASIC3.78□□□□□ -1.8
CD74P04233 RNU6-304P-201ENST00000364855 107 ntBASIC3.78□□□□□ -1.8
CD74P04233 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.78□□□□□ -1.8
CD74P04233 Z98745.1-201ENST00000402553 494 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms