Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC134698.5-201ENST00000519444 336 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.92□□□□□ -1.62
CHRNA1P02708 AC023043.4-201ENST00000612081 449 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 ZYXP1-201ENST00000617638 118 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 MIR6891-201ENST00000618788 93 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 AC022106.2-201ENST00000620114 757 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AC006065.6-201ENST00000625201 545 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.92□□□□□ -1.62
CHRNA1P02708 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA1P02708 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA1P02708 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA1P02708 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA1P02708 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA1P02708 MIR331-201ENST00000362302 94 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 MT-RNR1-201ENST00000389680 954 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AL080315.1-201ENST00000406055 466 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 TRIM60P17-201ENST00000415181 719 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 OR4C10P-201ENST00000434991 931 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AL357520.1-201ENST00000441557 453 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.91□□□□□ -1.62
CHRNA1P02708 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.91□□□□□ -1.62
CHRNA1P02708 AL591473.1-201ENST00000464297 313 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.91□□□□□ -1.62
CHRNA1P02708 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA1P02708 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.91□□□□□ -1.62
CHRNA1P02708 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.91□□□□□ -1.62
CHRNA1P02708 RN7SL176P-201ENST00000580352 264 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.91□□□□□ -1.62
CHRNA1P02708 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA1P02708 AC024941.1-201ENST00000612250 334 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AC015922.4-201ENST00000612568 690 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 AC015908.5-201ENST00000623289 343 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 RNA5SP196-201ENST00000625967 102 ntBASIC4.91□□□□□ -1.62
CHRNA1P02708 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA1P02708 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
CHRNA1P02708 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
CHRNA1P02708 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHRNA1P02708 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.9□□□□□ -1.62
CHRNA1P02708 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CHRNA1P02708 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CHRNA1P02708 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
CHRNA1P02708 RNA5SP388-201ENST00000362584 119 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 RNU4-23P-201ENST00000362839 140 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.9□□□□□ -1.63
CHRNA1P02708 UBE2V2P3-201ENST00000433562 437 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 KCTD10P1-201ENST00000434203 625 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AC012671.1-201ENST00000451912 203 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHRNA1P02708 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AK4P6-201ENST00000505168 528 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 HMGB3P16-201ENST00000508037 287 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.9□□□□□ -1.63
CHRNA1P02708 MIR1254-2-201ENST00000579553 63 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 VN1R85P-201ENST00000601587 426 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AC113403.1-201ENST00000604910 193 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AL592494.3-201ENST00000609485 464 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AC015914.2-201ENST00000618167 288 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AC015722.2-201ENST00000622210 551 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 AL022322.2-201ENST00000624072 20397 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHRNA1P02708 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHRNA1P02708 CASC19-204ENST00000641001 2055 ntBASIC4.9□□□□□ -1.63
CHRNA1P02708 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.63
CHRNA1P02708 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA1P02708 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNA1P02708 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHRNA1P02708 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA1P02708 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA1P02708 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.89□□□□□ -1.63
CHRNA1P02708 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHRNA1P02708 AL355852.1-201ENST00000454081 1771 ntBASIC4.89□□□□□ -1.63
CHRNA1P02708 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNA1P02708 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHRNA1P02708 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA1P02708 RPS26P8-201ENST00000393490 348 ntBASIC4.89□□□□□ -1.63
CHRNA1P02708 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNA1P02708 RPL21P43-201ENST00000425440 472 ntBASIC4.89□□□□□ -1.63
CHRNA1P02708 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNA1P02708 AC122718.1-201ENST00000439448 744 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms