Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC28A1O00337 AL445437.1-201ENST00000623157 3087 ntBASIC4.48□□□□□ -1.69
SLC28A1O00337 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC28A1O00337 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.48□□□□□ -1.69
SLC28A1O00337 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC28A1O00337 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC28A1O00337 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC28A1O00337 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 RNA5SP123-201ENST00000363244 119 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC092642.1-201ENST00000392417 425 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 Z98745.1-201ENST00000402553 494 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 RNU2-17P-201ENST00000410290 190 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 OR51B3P-201ENST00000412287 913 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC013404.1-201ENST00000413068 249 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 RPL21P108-201ENST00000413857 481 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AL357078.2-201ENST00000416486 427 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC004690.1-201ENST00000418216 328 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 OR2B7P-201ENST00000429302 934 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 RBMY2QP-201ENST00000429799 1147 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AL035458.1-201ENST00000433096 585 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 PTP4A1P3-201ENST00000433661 420 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 YWHAZP2-201ENST00000440317 728 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 OR1H1P-201ENST00000448731 937 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 MTND2P30-201ENST00000456663 382 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC012158.1-204ENST00000483430 465 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC008953.1-201ENST00000497334 318 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 SCARNA22-201ENST00000503991 125 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC147055.3-201ENST00000510547 851 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 BTF3P13-201ENST00000513224 490 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 RNA5SP446-201ENST00000515955 82 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 SNORA31.13-201ENST00000516624 135 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.47□□□□□ -1.69
SLC28A1O00337 RN7SL652P-201ENST00000577769 300 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 MIR7973-1-201ENST00000614683 76 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 AC015726.3-201ENST00000624501 418 ntBASIC4.47□□□□□ -1.69
SLC28A1O00337 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SLC28A1O00337 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC28A1O00337 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.47□□□□□ -1.69
SLC28A1O00337 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC28A1O00337 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SLC28A1O00337 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SLC28A1O00337 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SLC28A1O00337 RN7SKP224-201ENST00000364140 325 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 LINC01881-201ENST00000416103 412 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 MORF4L1P7-201ENST00000426038 703 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 FO393419.3-201ENST00000428741 282 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 RPL21P91-201ENST00000429231 479 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 RPL23AP25-201ENST00000430973 463 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 BX119904.1-201ENST00000432026 348 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 NRBF2P3-201ENST00000432731 865 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC28A1O00337 AL450263.2-201ENST00000439400 589 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 SUMO2P1-206ENST00000445436 284 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 AL353718.1-201ENST00000451028 517 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 EIF2S2P5-201ENST00000457635 968 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 RPS20P4-201ENST00000461659 355 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 AC007688.1-201ENST00000475592 759 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC28A1O00337 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC28A1O00337 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 SLC25A36P1-201ENST00000590111 465 ntBASIC4.46□□□□□ -1.7
SLC28A1O00337 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC28A1O00337 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC28A1O00337 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms